G58962


Basic Information

Item Value
gene id G58962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53812083 ~ 53812369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65550
atatataatttATGTCAACCACTTGCGTGGTGCAAAGGACTGTTTTTATTTGCAACTAGTAAgaacttttttttttgtgagacCCTGATTCACGTGAACGTACAAGTCCATTTCTGTTTTTTCTATTAATGCCAGGAGAATCCGTAATATTTTTAAGAGACAGGAATGAGGTTTCTAAAGCAATTTCCTGTATTGAAGACTTTTCCTTAGTTTCGGATTTGAAAATTAATATCAATAAGTCAGTCTTATTTCCACTCAAGGATTGTGTTTTACAGGAAGTATATGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65550 True 287 lncRNA 0.39 1 53812083 53812369

Neighbor

gene id symbol gene type direction distance location
LOC118936380 LOC106581842 coding upstream 106662 53632830 ~ 53705421 (+)
LOC118964886 NA coding upstream 125985 53685401 ~ 53686098 (+)
LOC110516195 LOC106581842 coding upstream 191250 53598194 ~ 53620959 (+)
LOC110525170 LOC106573051 coding upstream 254474 53491846 ~ 53557609 (+)
LOC110525151 LOC106561689 coding upstream 326530 53437534 ~ 53485553 (+)
LOC110525273 LOC106561706 coding downstream 74551 53886920 ~ 53903845 (+)
LOC110525287 LOC106573038 coding downstream 101559 53913928 ~ 53938476 (+)
LOC110525297 LOC106573037 coding downstream 143426 53955795 ~ 53966503 (+)
LOC110525327 LOC106573036 coding downstream 232444 54044813 ~ 54089850 (+)
LOC118964411 NA coding downstream 430452 54242821 ~ 54249212 (+)
G58909 LOC106581842 non-coding upstream 46671 53765180 ~ 53765412 (+)
G58907 NA non-coding upstream 51213 53760659 ~ 53760870 (+)
G58906 NA non-coding upstream 51993 53759834 ~ 53760090 (+)
G58852 NA non-coding upstream 98328 53713337 ~ 53713755 (+)
G58872 NA non-coding upstream 119939 53657802 ~ 53692144 (+)
G58963 NA non-coding downstream 705 53813074 ~ 53813429 (+)
G58964 NA non-coding downstream 2279 53814648 ~ 53854415 (+)
G59016 NA non-coding downstream 142476 53954845 ~ 53955147 (+)
G58993 NA non-coding downstream 154704 53967073 ~ 53969548 (+)
LOC110524575 fgf3 other upstream 2361148 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3728087 50037523 ~ 50184257 (+)
G53181 NA other upstream 4918171 48893497 ~ 48893912 (+)
G52324 NA other upstream 5428826 48380542 ~ 48383257 (+)
G59031 NA other downstream 175771 53988140 ~ 53988597 (+)
G59963 NA other downstream 908819 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2093139 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 2207107 56019476 ~ 56030371 (+)

Expression


Co-expression Network