G59016


Basic Information

Item Value
gene id G59016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53954845 ~ 53955147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65611
cgttgtttcagcaggatgtcatgtcatggaatagatttattgataatatctgttggaaaaaaattTGGCGGTTGCCACaaacatacctacttgttaacaaaattaaggaagtttcctttaaaattgttcataaatattatcctgccaaccactatatgaagaagtttaaggaaaacattaactcaaattgctccttttgtaatgaccacccagaaacagtgttgcatcctttttggcattgtattcatgtaagaaaactgtggcaagacatcagtagatttataattgaacacatttatgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU65611 True 303 lncRNA 0.33 1 53954845 53955147

Neighbor

gene id symbol gene type direction distance location
LOC110525287 LOC106573038 coding upstream 16369 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 51000 53886920 ~ 53903845 (+)
LOC118936380 LOC106581842 coding upstream 249424 53632830 ~ 53705421 (+)
LOC118964886 NA coding upstream 268747 53685401 ~ 53686098 (+)
LOC110516195 LOC106581842 coding upstream 334012 53598194 ~ 53620959 (+)
LOC110525297 LOC106573037 coding downstream 648 53955795 ~ 53966503 (+)
LOC110525327 LOC106573036 coding downstream 89666 54044813 ~ 54089850 (+)
LOC118964411 NA coding downstream 287674 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 327792 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 465275 54420422 ~ 54444532 (+)
G58964 NA non-coding upstream 100430 53814648 ~ 53854415 (+)
G58963 NA non-coding upstream 141416 53813074 ~ 53813429 (+)
G58962 NA non-coding upstream 142476 53812083 ~ 53812369 (+)
G58909 LOC106581842 non-coding upstream 189433 53765180 ~ 53765412 (+)
G58993 NA non-coding downstream 11926 53967073 ~ 53969548 (+)
G58992 NA non-coding downstream 14475 53969622 ~ 53971233 (+)
G59021 NA non-coding downstream 18241 53973388 ~ 53973959 (+)
G59024 NA non-coding downstream 21151 53976298 ~ 53976613 (+)
G59032 NA non-coding downstream 27489 53982636 ~ 53983252 (+)
LOC110524575 fgf3 other upstream 2503910 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3870849 50037523 ~ 50184257 (+)
G53181 NA other upstream 5060933 48893497 ~ 48893912 (+)
G52324 NA other upstream 5571588 48380542 ~ 48383257 (+)
G59031 NA other downstream 32993 53988140 ~ 53988597 (+)
G59963 NA other downstream 766041 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1950361 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 2064329 56019476 ~ 56030371 (+)

Expression


Co-expression Network