Gene
RNA
| Item | Value |
|---|---|
| gene id | G59197 |
| gene name | LOC101154678 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 53974643 ~ 53974863 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU65812 | True | 221 | lncRNA | 0.47 | 1 | 53974643 | 53974863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964352 | NA | coding | downstream | 100407 | 53872120 ~ 53874236 (-) |
| LOC110525263 | LOC106581842 | coding | downstream | 106553 | 53853860 ~ 53868090 (-) |
| LOC118964340 | NA | coding | downstream | 132901 | 53840583 ~ 53841742 (-) |
| LOC118964896 | LOC106581842 | coding | downstream | 138055 | 53822057 ~ 53836588 (-) |
| LOC118964895 | LOC106581842 | coding | downstream | 152318 | 53813985 ~ 53822325 (-) |
| LOC110525320 | snx33 | coding | upstream | 14664 | 53989527 ~ 54019550 (-) |
| LOC110525336 | pf21a | coding | upstream | 138276 | 54113139 ~ 54223986 (-) |
| LOC110525355 | LOC106573031 | coding | upstream | 333187 | 54308050 ~ 54354027 (-) |
| LOC110525376 | LOC106573030 | coding | upstream | 398248 | 54373111 ~ 54382667 (-) |
| nat10 | nat10 | coding | upstream | 489544 | 54464407 ~ 54503021 (-) |
| G59196 | NA | non-coding | downstream | 142 | 53974205 ~ 53974501 (-) |
| G59178 | NA | non-coding | downstream | 2890 | 53971527 ~ 53971753 (-) |
| G59172 | NA | non-coding | downstream | 19102 | 53955315 ~ 53955541 (-) |
| G59110 | NA | non-coding | downstream | 57374 | 53856566 ~ 53917269 (-) |
| G59104 | NA | non-coding | downstream | 138898 | 53830747 ~ 53835745 (-) |
| G59198 | NA | non-coding | upstream | 6 | 53974869 ~ 53975083 (-) |
| G59199 | NA | non-coding | upstream | 963 | 53975826 ~ 53976110 (-) |
| G59193 | NA | non-coding | upstream | 8039 | 53982902 ~ 53983274 (-) |
| G59189 | NA | non-coding | upstream | 9774 | 53984637 ~ 53984824 (-) |
| G59181 | NA | non-coding | upstream | 11676 | 53986539 ~ 53987790 (-) |
| G58958 | LOC106581842 | other | downstream | 177629 | 53791830 ~ 53797014 (-) |
| LOC110525178 | LOC106581842 | other | downstream | 211747 | 53761612 ~ 53774544 (-) |
| G58842 | NA | other | downstream | 385873 | 53588422 ~ 53588770 (-) |
| G58718 | LOC100194703 | other | downstream | 548327 | 53425964 ~ 53426316 (-) |
| LOC110525078 | LOC105021811 | other | downstream | 636256 | 53334724 ~ 53338484 (-) |
| G59978 | NA | other | upstream | 754268 | 54729131 ~ 54737244 (-) |
| G60516 | NA | other | upstream | 1095529 | 55070392 ~ 55070899 (-) |
| G60572 | NA | other | upstream | 1175378 | 55150241 ~ 55154258 (-) |
| G60614 | NA | other | upstream | 1218434 | 55193297 ~ 55193723 (-) |
| G60624 | NA | other | upstream | 1228554 | 55203417 ~ 55203742 (-) |
