G59198



Basic Information


Item Value
gene id G59198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53974869 ~ 53975083 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU65813
ATgtacgtcagagcaaaaaccaagccataaggtgcaaggaattgtcggtagacaagattgtgtcgaggcacagatctggggaagggtaccgaaacatttctgcagcattgaaggtccccaagaacacagtggcttccatcattcttaaatggtagTAGTTTGAAAGAAACCattaagactcttcctagagctagtcgcccggccaaattgagcaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU65813 True 215 lncRNA 0.46 1 53974869 53975083

Neighbor


gene id symbol gene type direction distance location
LOC118964352 NA coding downstream 100633 53872120 ~ 53874236 (-)
LOC110525263 LOC106581842 coding downstream 106779 53853860 ~ 53868090 (-)
LOC118964340 NA coding downstream 133127 53840583 ~ 53841742 (-)
LOC118964896 LOC106581842 coding downstream 138281 53822057 ~ 53836588 (-)
LOC118964895 LOC106581842 coding downstream 152544 53813985 ~ 53822325 (-)
LOC110525320 snx33 coding upstream 14444 53989527 ~ 54019550 (-)
LOC110525336 pf21a coding upstream 138056 54113139 ~ 54223986 (-)
LOC110525355 LOC106573031 coding upstream 332967 54308050 ~ 54354027 (-)
LOC110525376 LOC106573030 coding upstream 398028 54373111 ~ 54382667 (-)
nat10 nat10 coding upstream 489324 54464407 ~ 54503021 (-)
G59197 LOC101154678 non-coding downstream 6 53974643 ~ 53974863 (-)
G59196 NA non-coding downstream 368 53974205 ~ 53974501 (-)
G59178 NA non-coding downstream 3116 53971527 ~ 53971753 (-)
G59172 NA non-coding downstream 19328 53955315 ~ 53955541 (-)
G59110 NA non-coding downstream 57600 53856566 ~ 53917269 (-)
G59199 NA non-coding upstream 743 53975826 ~ 53976110 (-)
G59193 NA non-coding upstream 7819 53982902 ~ 53983274 (-)
G59189 NA non-coding upstream 9554 53984637 ~ 53984824 (-)
G59181 NA non-coding upstream 11456 53986539 ~ 53987790 (-)
G59185 NA non-coding upstream 12898 53987981 ~ 53988486 (-)
G58958 LOC106581842 other downstream 177855 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 211973 53761612 ~ 53774544 (-)
G58842 NA other downstream 386099 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 548553 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 636482 53334724 ~ 53338484 (-)
G59978 NA other upstream 754048 54729131 ~ 54737244 (-)
G60516 NA other upstream 1095309 55070392 ~ 55070899 (-)
G60572 NA other upstream 1175158 55150241 ~ 55154258 (-)
G60614 NA other upstream 1218214 55193297 ~ 55193723 (-)
G60624 NA other upstream 1228334 55203417 ~ 55203742 (-)

Expression



Co-expression Network