G59279


Basic Information

Item Value
gene id G59279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54158652 ~ 54158904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65895
GATATAACTAGTGGGGTTTAACAACTCACgtcctgttgtaaatcaagggaGAAGATCCAGCCTGCGCTCTCCAAATTCACCAAAGGATTGTGCTTTGTCTCAACATACCTTTTTCCCGCTGAAACTCTAACACATTCAAAAACAAATAGAAATGGAACAATGTTTCTAGTATATAATGTAgggaatggtcagaggcgatCTATAGAACACTTATGTCATTTTGTTTTGTGATATCATTACaaatgttataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65895 True 253 lncRNA 0.43 1 54158652 54158904

Neighbor

gene id symbol gene type direction distance location
LOC110525327 LOC106573036 coding upstream 68802 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 192149 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 220176 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 254807 53886920 ~ 53903845 (+)
LOC118964886 NA coding upstream 472554 53685401 ~ 53686098 (+)
LOC118964411 NA coding downstream 83917 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 124035 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 261518 54420422 ~ 54444532 (+)
adal adal coding downstream 286551 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 1067635 55226539 ~ 55523230 (+)
G59276 NA non-coding upstream 4817 54153589 ~ 54153835 (+)
G59268 NA non-coding upstream 17895 54140535 ~ 54140757 (+)
G59265 NA non-coding upstream 22171 54136215 ~ 54136481 (+)
G59263 NA non-coding upstream 23725 54134687 ~ 54134927 (+)
G59262 NA non-coding upstream 24684 54133759 ~ 54133968 (+)
G59280 NA non-coding downstream 318 54159222 ~ 54159423 (+)
G59282 NA non-coding downstream 1991 54160895 ~ 54161468 (+)
G59284 NA non-coding downstream 7383 54166287 ~ 54167455 (+)
G59285 NA non-coding downstream 9370 54168274 ~ 54168491 (+)
G59291 NA non-coding downstream 13108 54172012 ~ 54172224 (+)
G59031 NA other upstream 170055 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 487379 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2707717 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4074656 50037523 ~ 50184257 (+)
G59963 NA other downstream 562284 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1746604 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1860572 56019476 ~ 56030371 (+)
G61804 NA other downstream 2087680 56246584 ~ 56247770 (+)
G61806 NA other downstream 2090984 56249888 ~ 56252015 (+)

Expression


Co-expression Network