G59299


Basic Information

Item Value
gene id G59299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54182981 ~ 54183379 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65915
GAAGAGTTGTGCTGGTGAGGTATGCCTACTAAATTTGTGAGCTGAGATAATTATCACCTACCACCCACAAGCGGAGAAAAAGGCCACAGCCATCTATAAGAATACCAAAGACACCGACATCTACAACGTGTAACAGACATGTCACCAGTTGGCTGTTCTAGCATGACTTAAATGTTAAATGCAGCTGTTttgatctcaatatcaaatcatttctgggtaacaattaagcaccttactgtgaaatggtaaaaaataaatacaaatagcttcttagcaaagagcaatttctaaaacaagaatttagctaggactgtctgggagtggtctgagtttGGAGGTGGAAACTAGCCGTTTTGGGAAGAGAGGTTTGAAACTctgtttcttattggtctattaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65915 True 399 lncRNA 0.39 1 54182981 54183379

Neighbor

gene id symbol gene type direction distance location
LOC110525327 LOC106573036 coding upstream 93131 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 216478 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 244505 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 279136 53886920 ~ 53903845 (+)
LOC118964886 NA coding upstream 496883 53685401 ~ 53686098 (+)
LOC118964411 NA coding downstream 59442 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 99560 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 237043 54420422 ~ 54444532 (+)
adal adal coding downstream 262076 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 1043160 55226539 ~ 55523230 (+)
G59297 NA non-coding upstream 1105 54181673 ~ 54181876 (+)
G59296 NA non-coding upstream 1355 54180605 ~ 54181626 (+)
G59291 NA non-coding upstream 10757 54172012 ~ 54172224 (+)
G59285 NA non-coding upstream 14490 54168274 ~ 54168491 (+)
G59284 NA non-coding upstream 15526 54166287 ~ 54167455 (+)
G59300 NA non-coding downstream 1201 54184580 ~ 54185172 (+)
G59378 LOC106573031 non-coding downstream 135950 54319329 ~ 54321609 (+)
G59442 NA non-coding downstream 235306 54418685 ~ 54424308 (+)
G59459 NA non-coding downstream 274001 54457380 ~ 54458833 (+)
G59489 NA non-coding downstream 321321 54504700 ~ 54505437 (+)
G59031 NA other upstream 194384 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 511708 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2732046 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4098985 50037523 ~ 50184257 (+)
G59963 NA other downstream 537809 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1722129 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1836097 56019476 ~ 56030371 (+)
G61804 NA other downstream 2063205 56246584 ~ 56247770 (+)
G61806 NA other downstream 2066509 56249888 ~ 56252015 (+)

Expression


Co-expression Network