G59794


Basic Information

Item Value
gene id G59794
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54394044 ~ 54458919 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66446
tctcatgctaccactagagtgaaagcaccgccagcattcaaaagtgaccaaaacatcagccaggaagcataggaactgagaagtggtctgtggttatcacctgcagaaccactcctttattgggggtgtcttgctaattccctataatttccacctgttgtctattccatttgcacaacagcatgtgacatttattgtcaatcagtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttgagtgttccctttatttttttgagcagtgtatatatacacacacacacacacacacagtacagtcaaggccaaaagttttgagaatgacacaaatattttcacagtctgctgcctcagtttataTGATGCCAATTTGCATatgctccagaatgttatgaaaagtgatcagatgaatttcaattaattgcaacgtccctctttgccatgcaaatgaactgaatcgcaaaaacaacatttccactgcatttcaggcctgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66446 True 534 lncRNA 0.37 2 54394044 54458919

Neighbor

gene id symbol gene type direction distance location
LOC110525376 LOC106573030 coding downstream 11377 54373111 ~ 54382667 (-)
LOC110525355 LOC106573031 coding downstream 40017 54308050 ~ 54354027 (-)
LOC110525336 pf21a coding downstream 170058 54113139 ~ 54223986 (-)
LOC110525320 snx33 coding downstream 374494 53989527 ~ 54019550 (-)
LOC118964352 NA coding downstream 519808 53872120 ~ 53874236 (-)
nat10 nat10 coding upstream 5488 54464407 ~ 54503021 (-)
caprin1b LOC100195798 coding upstream 45777 54504696 ~ 54570298 (-)
tspan18b tspan18 coding upstream 134284 54593203 ~ 54716059 (-)
LOC110525455 LOC106573025 coding upstream 371907 54830826 ~ 54872325 (-)
LOC110525462 LOC106561729 coding upstream 446438 54905357 ~ 54934644 (-)
G59721 NA non-coding downstream 96756 54279232 ~ 54297288 (-)
G59720 NA non-coding downstream 134131 54255010 ~ 54259913 (-)
G59625 NA non-coding downstream 207976 54185486 ~ 54186068 (-)
G59672 NA non-coding downstream 212414 54181174 ~ 54181630 (-)
G59673 NA non-coding downstream 213470 54180086 ~ 54180574 (-)
G59956 NA non-coding upstream 240163 54699082 ~ 54705581 (-)
G59957 NA non-coding upstream 245711 54704630 ~ 54711130 (-)
G59959 NA non-coding upstream 258548 54717467 ~ 54717739 (-)
G59965 NA non-coding upstream 261859 54720778 ~ 54721359 (-)
G59966 NA non-coding upstream 262492 54721411 ~ 54721732 (-)
G58958 LOC106581842 other downstream 597030 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 631148 53761612 ~ 53774544 (-)
G58842 NA other downstream 805274 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 967728 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 1055657 53334724 ~ 53338484 (-)
G59978 NA other upstream 270212 54729131 ~ 54737244 (-)
G60516 NA other upstream 611473 55070392 ~ 55070899 (-)
G60572 NA other upstream 691322 55150241 ~ 55154258 (-)
G60614 NA other upstream 734378 55193297 ~ 55193723 (-)
G60624 NA other upstream 744498 55203417 ~ 55203742 (-)

Expression


Co-expression Network