G59525


Basic Information

Item Value
gene id G59525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54570944 ~ 54571156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66158
CAGGTACTTTTGGGTAGTTCCAGGCCCTAGAAGTGAGGCCAGAGATAATAGTAACAGAATTCAGTGCTGTCTAATTTGAGTATAATGAAGTCTATTTCTTGTcatgttttctgtcctcagatacagagagctgtgaaagcctgtctgaagatgaagaggtcccaatgaagagcagtgggtctcaatcctggtcctggggtctcaaaggggtgc

Function

NR:

description
PREDICTED: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66158 True 213 lncRNA 0.46 1 54570944 54571156

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 106498 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 126412 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 273658 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 321732 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 481094 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 655383 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 991264 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 1102930 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 1244215 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 1405003 55976159 ~ 56024913 (+)
G59468 LOC100195798 non-coding upstream 37669 54518384 ~ 54533275 (+)
G59489 NA non-coding upstream 65507 54504700 ~ 54505437 (+)
G59459 NA non-coding upstream 112111 54457380 ~ 54458833 (+)
G59442 NA non-coding upstream 146636 54418685 ~ 54424308 (+)
G59378 LOC106573031 non-coding upstream 249335 54319329 ~ 54321609 (+)
G59542 NA non-coding downstream 22075 54593231 ~ 54594234 (+)
G59987 NA non-coding downstream 167571 54738727 ~ 54738954 (+)
G60010 NA non-coding downstream 184061 54755217 ~ 54755442 (+)
G60067 NA non-coding downstream 232481 54803637 ~ 54803875 (+)
G60070 NA non-coding downstream 233969 54805125 ~ 54805415 (+)
G59031 NA other upstream 582347 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 899671 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3120009 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4486948 50037523 ~ 50184257 (+)
G59963 NA other downstream 150032 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1334352 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1448320 56019476 ~ 56030371 (+)
G61804 NA other downstream 1675428 56246584 ~ 56247770 (+)
G61806 NA other downstream 1678732 56249888 ~ 56252015 (+)

Expression


Co-expression Network