G60070


Basic Information

Item Value
gene id G60070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54805125 ~ 54805415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66736
tatctgtacttactggtggcacagacgctgtttcatcctttcctacactgaaattacccttgcctaacgattgcgtctgaagctgggcttgttctcctgtatattatgagtacagcgactgcaattagaaggcatcatgttaatgttactacttagcttcggctgttggaggtcctgacgaaccatgtccagataaagtgtCCGGAGtaaaaaagttgaaaaaaaaatacataaagcctaagtctcacacactcacatgcacacacatatttaaacaaaaaaactaaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66736 True 291 lncRNA 0.42 1 54805125 54805415

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 340679 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 360593 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 507839 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 555913 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 715275 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 421124 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 757005 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 868671 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 1009956 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 1170744 55976159 ~ 56024913 (+)
G60067 NA non-coding upstream 1250 54803637 ~ 54803875 (+)
G60010 NA non-coding upstream 49683 54755217 ~ 54755442 (+)
G59987 NA non-coding upstream 66171 54738727 ~ 54738954 (+)
G59542 NA non-coding upstream 210891 54593231 ~ 54594234 (+)
G59525 NA non-coding upstream 233969 54570944 ~ 54571156 (+)
G60075 NA non-coding downstream 1937 54807352 ~ 54807582 (+)
G60257 NA non-coding downstream 239772 55045187 ~ 55045920 (+)
G60263 NA non-coding downstream 246560 55051975 ~ 55052301 (+)
G60274 NA non-coding downstream 264441 55069856 ~ 55070061 (+)
G60275 NA non-coding downstream 265137 55070552 ~ 55070849 (+)
G59963 NA other upstream 83662 54721188 ~ 54721463 (+)
G59031 NA other upstream 816528 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1133852 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3354190 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 1100093 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1214061 56019476 ~ 56030371 (+)
G61804 NA other downstream 1441169 56246584 ~ 56247770 (+)
G61806 NA other downstream 1444473 56249888 ~ 56252015 (+)
G63958 NA other downstream 3361150 58166565 ~ 58168178 (+)

Expression


Co-expression Network