G60075


Basic Information

Item Value
gene id G60075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54807352 ~ 54807582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66741
caagtAGACAATAACTTAGTCTGTGAAACAGGTAGGCTTACCTTTGATTTCTTGAATAGGAAAGaaatagtgtcacgccctgaccttagagatccttaatattctctatgtttggttaggtcagggtgtgactcgggtgggaaagtctatgttttctatttctttgtttttggccgtgtgtgtgtggttcccaatcagaggcagctgtctatcgctgtctctgattgggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66741 True 231 lncRNA 0.42 1 54807352 54807582

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 342906 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 362820 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 510066 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 558140 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 717502 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 418957 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 754838 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 866504 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 1007789 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 1168577 55976159 ~ 56024913 (+)
G60070 NA non-coding upstream 1937 54805125 ~ 54805415 (+)
G60067 NA non-coding upstream 3477 54803637 ~ 54803875 (+)
G60010 NA non-coding upstream 51910 54755217 ~ 54755442 (+)
G59987 NA non-coding upstream 68398 54738727 ~ 54738954 (+)
G59542 NA non-coding upstream 213118 54593231 ~ 54594234 (+)
G60257 NA non-coding downstream 237605 55045187 ~ 55045920 (+)
G60263 NA non-coding downstream 244393 55051975 ~ 55052301 (+)
G60274 NA non-coding downstream 262274 55069856 ~ 55070061 (+)
G60275 NA non-coding downstream 262970 55070552 ~ 55070849 (+)
G60229 NA non-coding downstream 264038 55071620 ~ 55073876 (+)
G59963 NA other upstream 85889 54721188 ~ 54721463 (+)
G59031 NA other upstream 818755 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1136079 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3356417 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 1097926 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1211894 56019476 ~ 56030371 (+)
G61804 NA other downstream 1439002 56246584 ~ 56247770 (+)
G61806 NA other downstream 1442306 56249888 ~ 56252015 (+)
G63958 NA other downstream 3358983 58166565 ~ 58168178 (+)

Expression


Co-expression Network