G60257


Basic Information

Item Value
gene id G60257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55045187 ~ 55045920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66928
gtcacgccctgacctgagtattctttgttttctttattgttttggttaggtcagggtgtgacatgggtgatgtatgtgtttttgtactgtctaggggttttgttggtttatggggttgtttatcatctaggtgtttatatatgtctatggttgcctagattggttctcaattagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatcttctttgggtatttcgtgggttattatctatgtctatgtctagttgcctgtgtctgcacatttatagtatagcttcacggtcgtcttattattttgtatagtttgtctagtgtacttcgtgtttTTCGTCATTCATTaaaagaatgtattcacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66928 True 381 lncRNA 0.38 2 55045187 55045920

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 580741 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 600655 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 747901 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 795975 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 955337 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 180619 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 516500 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 628166 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 769451 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 930239 55976159 ~ 56024913 (+)
G60075 NA non-coding upstream 237605 54807352 ~ 54807582 (+)
G60070 NA non-coding upstream 239772 54805125 ~ 54805415 (+)
G60067 NA non-coding upstream 241312 54803637 ~ 54803875 (+)
G60010 NA non-coding upstream 289745 54755217 ~ 54755442 (+)
G59987 NA non-coding upstream 306233 54738727 ~ 54738954 (+)
G60263 NA non-coding downstream 6055 55051975 ~ 55052301 (+)
G60274 NA non-coding downstream 23936 55069856 ~ 55070061 (+)
G60275 NA non-coding downstream 24632 55070552 ~ 55070849 (+)
G60229 NA non-coding downstream 25700 55071620 ~ 55073876 (+)
G60587 NA non-coding downstream 130294 55176214 ~ 55176428 (+)
G59963 NA other upstream 323724 54721188 ~ 54721463 (+)
G59031 NA other upstream 1056590 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1373914 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3594252 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 859588 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 973556 56019476 ~ 56030371 (+)
G61804 NA other downstream 1200664 56246584 ~ 56247770 (+)
G61806 NA other downstream 1203968 56249888 ~ 56252015 (+)
G63958 NA other downstream 3120645 58166565 ~ 58168178 (+)

Expression


Co-expression Network