G60229


Basic Information

Item Value
gene id G60229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55071620 ~ 55073876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66900
GCTTTATAATAAGTTTGTTTATTCCATTGCCGTTACCCTTCTCGTCCATGTATTTGCTTAATGTTTGGTATCtgtaatatatttatatttacattgGTGGTACATAAATACATACAGAAGAGGCTGGGACAGGCCTTTCGTTCCTACAGTATTAACACTATTAGCTCACACCTCTTCCTTCTCATATTCATCccttttctcctccccctctttttgCTCTTCCTCCCCTCAGCTCATGATGGAGGTATAGGACTTAAATAACCTCACCAGGCCTTCtagattaatcaatcaatcaattattaCATATGACCCTCTCCACAATTAATATTACCTGCACATCCCCATAATGAATTATGAACACATACTGAaaaagagacatgagagagaaagaaagtgagagatcAAGAgagggaaataaataaatatgtacaTGACTACATAGTATAAGACTCGTtatgagatgaggctggtgtgttGGTACATTAAAAAGGTGcatttaaaaaacacacacaggttttgttcttctatcctcgtggggacctaaaattgaTTTCCATTAAAAATAATATTTTCCTTAACCCAAAATCTAACTCCTAACCGCTAACACTaaatataaccctaaccttaaacctaacatAGCCTTTGTTCTCATGGGGACATGGGAAGTGTCCCCCCGGTGGACAATTTTCCTTATTTTACTGTCATGGAGACTTTTGGGGATTTTAGAgccccacaaggatagaagaaccaacccacccccacccccctacaTTCACACTCATACAAACACGCATTCACCCAACAGCTACAAGATATGGAGCAGACATACAGTCAAATACCTCCCCCATCACAGTGAATAAGAATATACCATACCACAAACTACAAAACATTGAGATTCTCCTCAAATGCAAGTAGTGTGCAAAACGAACTGAGCTGGGCATCGACGACGTACGCTTGAAATGGAGTAACAAACTGAATTCCAACAACAGTGCTTCTTTTATATTTTAGTATTTATACATATATTTCAGCCCCAACTTTGTAAAACTATAATTAATTATCTATATACAGTAACTGTAGCCACTCACGTTAGACAACAGTGCGCTAGTAAAGACGGCTtttgaggaagagggggagaatgaggaggagggatAGGTTTTGTTTGTAAGAGTTCACACATTATTTTGAGATATCGTAAATTTACACCCAATATTAGATGAGAATAGGTAATTTCCTTCTTTTCACAACTAAAACATAAACACATACTCAGGAGATGGCATGGTACACTAATATACAATATCTACTGTTGCTCAACATGTTAGCGTATGGATTTATTACAAGGTTAAAGTCTAAGGATATGTATTCACGTGTGACTTTagatgagtgtgtatgtgtgtgtgtgtgtgtgtatttgctccCCCACGTGCATTTATGTATGTGTGAACTGTACTACCGTGTTTGTGTATTTGTATCAGTATAATACTTCAACATAGTACAACCCATCCACATTCTTGCAGATAATCCATACGTCTTCAGTTGGTCAGTCAAAGTCTCTGTCCCTGCCTTGGTTGATTATCAGTTGTGTAAGGGTTGTCAGTCTCTGCTGGGGTTCTACGGGCTCAGTGATAAGGGAGTAGTGTGGGGTAGAGACGCTCGATAGGGCTAGGACTATGAGCAGGATGGACAACAAAGACACACGTATGTACATATCATTGgcagatacagtatatattataaaCTAGAGGGTAAGGTGTGGAATATTACAGTGTGAACGTGCAAGTGTGAATGGAGTGGAGGCATCTAGTTCCATAGCTAtccatttctcctcctcttccctcctttctccccctctctctctctttcttctctctcccaaAGCCATCTGGGGATGATGGGTAAAAAGCTGGAGAGTGATGAGCGGTGAACACACACACTAGGAAacac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU66900 True 1941 lncRNA 0.58 2 55071620 55073876

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 607174 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 627088 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 774334 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 822408 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 981770 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 152663 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 488544 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 600210 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 741495 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 902283 55976159 ~ 56024913 (+)
G60275 NA non-coding upstream 771 55070552 ~ 55070849 (+)
G60274 NA non-coding upstream 1559 55069856 ~ 55070061 (+)
G60263 NA non-coding upstream 19319 55051975 ~ 55052301 (+)
G60257 NA non-coding upstream 25700 55045187 ~ 55045920 (+)
G60075 NA non-coding upstream 264038 54807352 ~ 54807582 (+)
G60587 NA non-coding downstream 102338 55176214 ~ 55176428 (+)
G60593 NA non-coding downstream 109791 55183667 ~ 55183905 (+)
G60609 NA non-coding downstream 117796 55191672 ~ 55191885 (+)
G60613 NA non-coding downstream 119382 55193258 ~ 55193605 (+)
G60631 NA non-coding downstream 132787 55206663 ~ 55206882 (+)
G59963 NA other upstream 350157 54721188 ~ 54721463 (+)
G59031 NA other upstream 1083023 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1400347 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3620685 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 831632 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 945600 56019476 ~ 56030371 (+)
G61804 NA other downstream 1172708 56246584 ~ 56247770 (+)
G61806 NA other downstream 1176012 56249888 ~ 56252015 (+)
G63958 NA other downstream 3092689 58166565 ~ 58168178 (+)

Expression


Co-expression Network