G60587



Basic Information


Item Value
gene id G60587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55176214 ~ 55176428 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU67272
CTATAGGAGAACCTGTTTGCTACTAAATTATGGGACAATAAGGAAGCCTTCATCTATGTGAccatagcgtatgtgtaggtatgcaCGGCTGAACTAAATTGTAGGGATAGGTTTGAgaaagtccatgtaatgctttgtaacttagcagtaaaacattgacatcagcactagccttaacaggaagccagaaatagcactggagtaatataatACAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU67272 True 215 lncRNA 0.44 1 55176214 55176428

Neighbor


gene id symbol gene type direction distance location
adal adal coding upstream 711768 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 731682 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 878928 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 927002 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 1086364 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 50111 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 385992 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 497658 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 638943 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 799731 55976159 ~ 56024913 (+)
G60229 NA non-coding upstream 102338 55071620 ~ 55073876 (+)
G60275 NA non-coding upstream 105365 55070552 ~ 55070849 (+)
G60274 NA non-coding upstream 106153 55069856 ~ 55070061 (+)
G60263 NA non-coding upstream 123913 55051975 ~ 55052301 (+)
G60257 NA non-coding upstream 130294 55045187 ~ 55045920 (+)
G60593 NA non-coding downstream 7239 55183667 ~ 55183905 (+)
G60609 NA non-coding downstream 15244 55191672 ~ 55191885 (+)
G60613 NA non-coding downstream 16830 55193258 ~ 55193605 (+)
G60631 NA non-coding downstream 30235 55206663 ~ 55206882 (+)
G60634 NA non-coding downstream 32890 55209318 ~ 55209673 (+)
G59963 NA other upstream 454751 54721188 ~ 54721463 (+)
G59031 NA other upstream 1187617 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1504941 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3725279 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 729080 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 843048 56019476 ~ 56030371 (+)
G61804 NA other downstream 1070156 56246584 ~ 56247770 (+)
G61806 NA other downstream 1073460 56249888 ~ 56252015 (+)
G63958 NA other downstream 2990137 58166565 ~ 58168178 (+)

Expression



Co-expression Network