G60933


Basic Information

Item Value
gene id G60933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55426361 ~ 55428202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU67641
ctctgaTACAAAAGAAGCGCTACAAAACGGCACAAATTCACAAATCTGATATTGCGCTCATCAGATATACCTTCAGATAAATCAATGATTACAATTTTGTCCAATAATGGACTGGTGCCCtgattcataaaaaaaaaatatgaatcatCCTTAGAGATAAATTCACACATTTTTAGTAATAACTTGGCCAATATTCCATTTCAATAATATGAGCATCAATACAGAAAGGTAAAATGAGGACTGTTCTAAATTATATAACACGGGTGTAAAATCTTTGCTGTtcctaatttaaaaaataaataaccacATTCTAATCTACAGATTAACTAGACTCACACCCCTGAGCAAGTGTGCCACATTCCATGACTGTCAAACAGATAAAGtgatacacagtgtacaaaacattatgaacacctgctctttccatgacGTATGATCCTCAttgatgttaaatccacttcaatcattgttgatgatggggaagagacaggttgaAGACACATTTTcgaccttgagacaattgagacatggattgtgcatgtgtgccattcagagagtgaatgggcaagacaaaaaatatTCAAGTGACTTTgtacggggtatggtagtaggtgccaggcgtacctgtttgtgtcaagaactgcaacgctgctggggttttcacactcaaccgTTTCTCGTGTGCATTAaaaatggttcaccacccaaaggacagccagccaacttaacacaattgtgggaagcattggagtcaacatgggccagcatccctgtgaaacgcttttgacaccttgtggagtccatatGCCgctacgaattgaggctgttcttagGGCAAAGGAGGGGTGTTCTTAATTTTTGGGGCACTCAATGCATGTGTGCCTTTTATTGTTGATCATTCATTATATTTCACTACTTCTTCACCTCTTTGACCAGGTGCCAGGTCAGGCCATGATTGGTGGAGAACTCCAGGCGGACCTGTGTGTCGATGTGGGGGGAGGGGTCTCTGCCGCAGCCCATGACCAATGAGAACTGCAGTGTGTAGGAGGCTCCAATCTGCATGGACTGGGTCTCCACATAACGGATACTGGAGCCTGGGCTGGGCTCTCCTGAGAAACTACATGACATCAAGTACATTACTGAAGTCCAGACTTATGGTGTTGAACAGCACAGAGGTCATAGTGATCTCATCCACTGCCCAAACGTCATGCCCACGCCCAGAGTGGTACGGCTGCCACCAACGGAACTGCACCCCAAACCTACGGGCACCGGGGGGTAACTCCACTGA

Function

NR:

description
LOW QUALITY PROTEIN: reelin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67641 True 1288 lncRNA 0.44 3 55426361 55428202

Neighbor

gene id symbol gene type direction distance location
LOC110525476 LOC106573024 coding downstream 298091 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 392102 54978911 ~ 55034259 (-)
LOC110525471 NA coding downstream 459808 54963456 ~ 54966553 (-)
LOC110525462 LOC106561729 coding downstream 491717 54905357 ~ 54934644 (-)
LOC110525455 LOC106573025 coding downstream 554036 54830826 ~ 54872325 (-)
LOC110525505 LOC106573040 coding upstream 316205 55744407 ~ 55801039 (-)
LOC110525190 LOC106573044 coding upstream 473695 55901897 ~ 56147404 (-)
LOC110525232 NA coding upstream 641003 56069205 ~ 56079783 (-)
LOC110521481 LOC106573508 coding upstream 1107467 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 1363419 56791621 ~ 56873384 (-)
G60918 NA non-coding downstream 9571 55415676 ~ 55416790 (-)
G60837 NA non-coding downstream 160877 55260989 ~ 55265484 (-)
G60646 NA non-coding downstream 210660 55215425 ~ 55215701 (-)
G60636 NA non-coding downstream 216019 55210017 ~ 55210342 (-)
G60630 NA non-coding downstream 219726 55206401 ~ 55206635 (-)
G61003 NA non-coding upstream 101127 55529329 ~ 55529546 (-)
G61006 NA non-coding upstream 102339 55530541 ~ 55530745 (-)
G61008 NA non-coding upstream 102868 55531070 ~ 55531272 (-)
G61556 NA non-coding upstream 383685 55811887 ~ 55812149 (-)
G61522 NA non-coding upstream 387204 55815406 ~ 55830189 (-)
G60624 NA other downstream 222619 55203417 ~ 55203742 (-)
G60614 NA other downstream 232638 55193297 ~ 55193723 (-)
G60572 NA other downstream 272103 55150241 ~ 55154258 (-)
G60516 NA other downstream 355462 55070392 ~ 55070899 (-)
G59978 NA other downstream 689117 54729131 ~ 54737244 (-)
G61563 NA other upstream 404623 55832825 ~ 55833928 (-)
G61715 NA other upstream 725228 56153430 ~ 56153918 (-)
G61978 NA other upstream 1096768 56524970 ~ 56533975 (-)
G63093 NA other upstream 1607465 57035667 ~ 57062848 (-)
G63328 NA other upstream 1968992 57397194 ~ 57398488 (-)

Expression


Co-expression Network