G61196


Basic Information

Item Value
gene id G61196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55898060 ~ 55899076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU67925
CCCATTCCAACGGCCAACGCCAGTGCAAAATCAAATAACTGAATACATTGTACATAAAAGCCAATGACTGTAATGGTGGGAACCTGATAACCTGACAGTCCTACCACCAGCCTACTGTTTATTCTGGACAGTGCTTTGGAGGATGAAGATACTAAGGGTAAGCTGCTTAGCGTTTCATATACTTTTTTTGGTCATGTCAATAGTCAAATTCAGTTTCTatatcagatatgaaaataataGTGGCTTTTCTTTCGAAATGTTATAAAAGTCCACTCTGGCTAGAGCTAAAGGCAGGCTACAGGAGGACAATTAGGATTACACATTATACCTTGACATACACTTGTAATGCACTGCTCTCTCTGCTGCGAGTCCATCATAGTATGTCCCATGCATACCTAATACATTTGTAATTGAGTTTAAATTCTGTAATGCTGGTAGCTATATCAGTCTATCAACCCTTGATGAGTGAAAGAAAGTGAATAATCACTAATTAATGATTTGGAGGAAAACAAACCACAGACCTTCTTTAGGAAgtcatttttttcccccctttggTAAAACTGTTTAGGCTTATACTTAATTAGAATCTGATGCCTGTAATATAATGCAATCGTTTTCAATTATAtttcattatattatattctgtgaATATTTGAGCATTTTCCAGACAAATCTCGAGCAATAaggtgtgtatagtgtatagtttTCTGTAAGCATAAGCGAGGCCACTGTccaatttaatttaaaaaaattagagGGTGGAAACTGTGACGTTGGCCTAATGTATTTGCTTTCGTTGTCAGGATTTGTTTACACTTCAAGGTTATCTGTACAAGATTTGTCTTCGACTACCTCCAGAGGTGGTCATGATCTAATCACAATCAGTTCAAAATGCATCTTTTGATTGTCTACACCTGTCGAAAAATGTGGGCagaatcagaatgtggacaagatcaggaaaacagacgcatgttagaaccaggtataaacagggctagagagagagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67925 True 1017 lncRNA 0.37 1 55898060 55899076

Neighbor

gene id symbol gene type direction distance location
LOC110525514 LOC106573043 coding upstream 67874 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 159643 55674086 ~ 55738417 (+)
LOC110532459 NA coding upstream 226216 55562420 ~ 55671844 (+)
LOC110532453 reln coding upstream 374836 55226539 ~ 55523230 (+)
adal adal coding upstream 1433614 54445455 ~ 54464446 (+)
LOC118964919 NA coding downstream 77083 55976159 ~ 56024913 (+)
LOC110525521 LOC106576899 coding downstream 652672 56551748 ~ 56596653 (+)
eif3s6ip LOC106576896 coding downstream 995176 56894252 ~ 56904226 (+)
vsir cssa18h10orf54 coding downstream 1136532 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 1723191 57622267 ~ 57765398 (+)
G61194 NA non-coding upstream 1177 55896276 ~ 55896883 (+)
G61186 NA non-coding upstream 58219 55839162 ~ 55839841 (+)
G61175 NA non-coding upstream 88078 55809751 ~ 55809982 (+)
G61168 LOC106573040 non-coding upstream 96622 55800550 ~ 55801438 (+)
G61164 NA non-coding upstream 100571 55797273 ~ 55797489 (+)
G61198 NA non-coding downstream 1920 55900996 ~ 55901342 (+)
G61218 LOC106560732 non-coding downstream 33156 55932232 ~ 55934327 (+)
G61262 NA non-coding downstream 96269 55995345 ~ 55999178 (+)
G61380 NA non-coding downstream 248826 56147902 ~ 56148117 (+)
G61383 NA non-coding downstream 250484 56149560 ~ 56149847 (+)
G59963 NA other upstream 1176597 54721188 ~ 54721463 (+)
LOC110525327 LOC106573036 other upstream 1835806 54044813 ~ 54089850 (+)
G59031 NA other upstream 1909463 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 2226787 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 4447125 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 6432 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 120400 56019476 ~ 56030371 (+)
G61804 NA other downstream 347508 56246584 ~ 56247770 (+)
G61806 NA other downstream 350812 56249888 ~ 56252015 (+)
G63958 NA other downstream 2267489 58166565 ~ 58168178 (+)

Expression


Co-expression Network