G61202 (LOC106573044)


Basic Information

Item Value
gene id G61202
gene name LOC106573044
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55905508 ~ 55923376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU67933
CCGTCGTGGAGGTAGAGCGGGGGAGGGTGGCCGGGTGGCTGGGCGACCGGGCTCTGCTGGGTGCCTGCCGGGCTGGGCTGGGCGTCCGCTCCTGGGGTAGGCTGTGTGGCTGCTGCTGGTTCTTGGCCTGGCTGGTCTGGTGTTTGGCCGGGCAGAGCTGGTGGTGCTGGGCCTTCCTGGGTGGTGGTTGTTTGTCCCAGCTGGGCTGGTGCATGACCCGGCTGGGATGCTCCTTGGCTGGGCTGGTTGACTATGGGGCTTGGCTGGGCCTGGGGGCTGTGTTTCTGGGTCATGGGGCTCTGCTTATCTGAGCTGGGCCTCGAGTGGGGATCTTCCTCCGGTATGATGTGCAGGGTGACGATGAGTCCGGCGTCTTTGATGAGCTTGACGATGTCGGCGTGGGGCATGCTGATGATGGACTGCCCGTTGACGGCCAGGATCCGGTCGCCAACCTTCAGGCAGCCAAAGCGATCCGCTGGGCTGCCCTCAATGATACGCCCAATCTTGTGGGGCACAGCTAGTACGGGGAGTAGAATCAATGTTTTGGCAAATGTGCATAAACTTGTCAAGTGCTggacagaaaataaattgtaactGAAAGTATTGCCCGCAAATCTGCCCCCTGGTGGTTTATTgagatgcacacacaaacaagaatgtTTTGATCCCACTGGGTAGTTGAAGAACATCCCAGTGGGACTGAAATGTTGTCTTGCGTGTTTCTCAACAAACCACTGTGGGAGCATATTACAGAATAAACA

Function

NR:

description
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67933 True 761 TUCP 0.58 2 55905508 55923376

Neighbor

gene id symbol gene type direction distance location
LOC110525514 LOC106573043 coding upstream 75322 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 167091 55674086 ~ 55738417 (+)
LOC110532459 NA coding upstream 233664 55562420 ~ 55671844 (+)
LOC110532453 reln coding upstream 382284 55226539 ~ 55523230 (+)
adal adal coding upstream 1441062 54445455 ~ 54464446 (+)
LOC118964919 NA coding downstream 52783 55976159 ~ 56024913 (+)
LOC110525521 LOC106576899 coding downstream 628372 56551748 ~ 56596653 (+)
eif3s6ip LOC106576896 coding downstream 970876 56894252 ~ 56904226 (+)
vsir cssa18h10orf54 coding downstream 1112232 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 1698891 57622267 ~ 57765398 (+)
G61198 NA non-coding upstream 4166 55900996 ~ 55901342 (+)
G61196 NA non-coding upstream 6432 55898060 ~ 55899076 (+)
G61194 NA non-coding upstream 8625 55896276 ~ 55896883 (+)
G61186 NA non-coding upstream 65667 55839162 ~ 55839841 (+)
G61175 NA non-coding upstream 95526 55809751 ~ 55809982 (+)
G61218 LOC106560732 non-coding downstream 8856 55932232 ~ 55934327 (+)
G61262 NA non-coding downstream 71969 55995345 ~ 55999178 (+)
G61380 NA non-coding downstream 224526 56147902 ~ 56148117 (+)
G61383 NA non-coding downstream 226184 56149560 ~ 56149847 (+)
G61384 NA non-coding downstream 226817 56150193 ~ 56150566 (+)
G59963 NA other upstream 1184045 54721188 ~ 54721463 (+)
LOC110525327 LOC106573036 other upstream 1843254 54044813 ~ 54089850 (+)
G59031 NA other upstream 1916911 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 2234235 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 4454573 51449353 ~ 51451460 (+)
G61284 LOC106573044 other downstream 96100 56019476 ~ 56030371 (+)
G61804 NA other downstream 323208 56246584 ~ 56247770 (+)
G61806 NA other downstream 326512 56249888 ~ 56252015 (+)
G63958 NA other downstream 2243189 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 2298146 58221522 ~ 58223130 (+)

Expression


Co-expression Network