G61815



Basic Information


Item Value
gene id G61815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56361357 ~ 56361656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU68628
AAcatgttcaatcaatcaatcaaatttattttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgaagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacaaaacatggtcaagatgttcaaatgttcataaatgaccagcatggtcgaataataataag

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU68628 True 300 lncRNA 0.43 1 56361357 56361656

Neighbor


gene id symbol gene type direction distance location
LOC118964919 NA coding upstream 336444 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 531171 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 622940 55674086 ~ 55738417 (+)
LOC110532459 NA coding upstream 689513 55562420 ~ 55671844 (+)
LOC110532453 reln coding upstream 838133 55226539 ~ 55523230 (+)
LOC110525521 LOC106576899 coding downstream 190092 56551748 ~ 56596653 (+)
eif3s6ip LOC106576896 coding downstream 532596 56894252 ~ 56904226 (+)
vsir cssa18h10orf54 coding downstream 673952 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 1260611 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 1332842 57694498 ~ 57722025 (+)
G61802 NA non-coding upstream 120789 56239908 ~ 56240568 (+)
G61795 NA non-coding upstream 130457 56230532 ~ 56230900 (+)
G61775 NA non-coding upstream 154809 56206299 ~ 56206548 (+)
G61772 NA non-coding upstream 157623 56203334 ~ 56203734 (+)
G61763 NA non-coding upstream 163783 56197337 ~ 56197574 (+)
G61827 NA non-coding downstream 24509 56386165 ~ 56387289 (+)
G61857 NA non-coding downstream 77024 56438680 ~ 56438985 (+)
G61858 NA non-coding downstream 78118 56439774 ~ 56459034 (+)
G61869 NA non-coding downstream 115621 56477277 ~ 56479352 (+)
G61874 NA non-coding downstream 119471 56481127 ~ 56481380 (+)
G61806 NA other upstream 109342 56249888 ~ 56252015 (+)
G61804 NA other upstream 113587 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 330986 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 437981 55905508 ~ 55923376 (+)
G59963 NA other upstream 1639894 54721188 ~ 54721463 (+)
G63958 NA other downstream 1804909 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1859866 58221522 ~ 58223130 (+)
G64292 NA other downstream 2225202 58586858 ~ 58587585 (+)
G64315 NA other downstream 2303678 58665334 ~ 58665906 (+)
G64338 NA other downstream 2337640 58699296 ~ 58700379 (+)

Expression



Co-expression Network