G61877


Basic Information

Item Value
gene id G61877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56482665 ~ 56484251 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68702
ctgtcacccaaaagcaaatgacgtagtggtgcaggcttcattttgggcctacttttctaatggtcgctgcgcttagaccgagcgtgctacggtcaagcgggatatctcgttgaactcggcacggcctagggattacggtaatgccattgcctgctctctgtgtctttaagcaccgcactttatcactccatccttgaagtgtgtgtgtgagagcttttctttaacatctgttgggagaaatgactgatttacagttcatgagggttacctagtcacacatatgaagttttgaagaGATGTgccttttttaacccttcaaaacagacagtgtgacccaattaaaggcacttccggatggcacaggaagctataagtaaacacatgtattGATTGagatagccacttacagaatcctgagttttaagtctttaagttaagaattgactgatctacacaggtttgaatacagtgattttcataatgacaggttgtgTTTcaaaccacttccggttgctccaggaagcttagaatcaacacaggtagacctcatagtggcctgatggactgtcatcgaagacaggttcatacggcattcataacccacataggcttcaggttgaatttaggggtgcaggcaatgtattcctatggggagagaagtcaatgcaaactgtttgatgtaaacaccttttaactgttaaaacctgttggatctctaggggcgctatttcatttttggataaaaaacgttcccgttttaaacgcaatattttgtcacgaaaagatgctcgactatgcatattattgacagttttggaaagaaaacactctgaagtttcagaatctgcaaagatattgtctgtaagtgccccagaactcattctacaggcgaaaccaagatgaaacgtcaaacaggaaatgaccagaatttctgaagctctgttttctaatgtctccttatatggctgtgaatgcgacaggaataagcttagaccttctgccgtttccccaagatgtcggcagcattgtgacgtatttgtaggcatatcattggaagattgaccataagagactacattttccaagtgtccgcctggtgtcctgcgtcgaaattggtgcgcaaagccaggtgcaagtatttttccatttgattgagaggagaaaccatgcttccacgaacgatatatcatcgaagagatatgtgaaaaacaccttgaggattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagttcgcgttttgaggactgaattttcgggtttttttggtagccaaatgtgatgtacaaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatttgctatttaactgagagtctcctcattgaaaacatccgaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgctacgctagctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68702 True 1587 lncRNA 0.41 1 56482665 56484251

Neighbor

gene id symbol gene type direction distance location
LOC110525190 LOC106573044 coding downstream 335261 55901897 ~ 56147404 (-)
LOC110525232 NA coding downstream 402882 56069205 ~ 56079783 (-)
LOC110525505 LOC106573040 coding downstream 681626 55744407 ~ 55801039 (-)
LOC110525476 LOC106573024 coding downstream 1354395 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 1448406 54978911 ~ 55034259 (-)
LOC110521481 LOC106573508 coding upstream 51418 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 307370 56791621 ~ 56873384 (-)
cdh23 cdh23 coding upstream 420358 56904609 ~ 57560442 (-)
LOC110525582 fgfr2 coding upstream 1685239 58166565 ~ 58282805 (-)
LOC110532479 ate1 coding upstream 1869394 58353645 ~ 58535096 (-)
G61871 NA non-coding downstream 7037 56473369 ~ 56475628 (-)
G61868 NA non-coding downstream 18637 56463384 ~ 56464028 (-)
G61866 NA non-coding downstream 20069 56462391 ~ 56462596 (-)
G61864 NA non-coding downstream 21807 56460289 ~ 56460858 (-)
G61856 NA non-coding downstream 51524 56430917 ~ 56431141 (-)
G61975 NA non-coding upstream 4155 56488406 ~ 56493137 (-)
G61976 NA non-coding upstream 9833 56494084 ~ 56495409 (-)
G62009 NA non-coding upstream 85211 56569462 ~ 56598254 (-)
G62026 NA non-coding upstream 114417 56598668 ~ 56598996 (-)
G62030 NA non-coding upstream 118302 56602553 ~ 56602811 (-)
G61715 NA other downstream 328747 56153430 ~ 56153918 (-)
G61563 NA other downstream 649305 55832825 ~ 55833928 (-)
G60624 NA other downstream 1278923 55203417 ~ 55203742 (-)
G60614 NA other downstream 1288942 55193297 ~ 55193723 (-)
G60572 NA other downstream 1328407 55150241 ~ 55154258 (-)
G61978 NA other upstream 40719 56524970 ~ 56533975 (-)
G63093 NA other upstream 551416 57035667 ~ 57062848 (-)
G63328 NA other upstream 912943 57397194 ~ 57398488 (-)
G65147 NA other upstream 2300491 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 2660122 59144373 ~ 59199471 (-)

Expression


Co-expression Network