G61976


Basic Information

Item Value
gene id G61976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56494084 ~ 56495409 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68813
tactacccaccattgcgacctgtacgctctcgttggctggccctcgcttcatactcgtcgccaaacccactggctccatgtcatctacaagaccctgctaggtaaagtcccccccttatctcagctcgctggtcaccatagcatctcccacctgtagcacacgctccagcaggtatatctctctagtcacccccaaaaccaattctttctttggccgcctctctttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctacagtataatttagcccaaacaactacctctttcccaactgtatttaatttatttatttattttgctcctttgcaccccattatttttatttctactttgcacattcttccattgcaaaactaccattccagtgttttacttgctatattgtatttaccttgccaccatggccttttttgcctttacctcccttctcacctcatttgctcacattgtatatagacttgtttatactgtattattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatctgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaagtaaaataaaaaaaataaaaataagaatagCTTTCCATTGAAAGAGTATGGGctcccaaaaaatatatattctggtTGGTTTGTCTTTGGATTTTTACCTACCATaccaattgtgttatagtctcatacattattttaacatttctacaaatgtcaatgtgtgttctatccaatgatattatatacatatcctggcctctgggcctgagtaacagggagTTTATTTTGGGCACGtaagtcagacaggaagtggagaaaaatagaccctagccGGAATACATTTTAAATTTAGCAATTATCattccatcatgcttagggtcatgtataaaaatgctggacaggccattattttggttaCCATGGATATACACcacaggatgacaatgcccccatccacagggcacaagtTATTaatttgatgagcatgaaaatgtaatgtaaaccatatgccatcaAACATCAGATCTCAGCCCACCTGAACATTTACGGGAGATTTCTCAGTGGCGATTGAGACAGCATttttcaccaccatcaacaaaacaacagATGATTATATTTcttggtgtcgcatccctccagtagagttccaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68813 True 1326 lncRNA 0.40 1 56494084 56495409

Neighbor

gene id symbol gene type direction distance location
LOC110525190 LOC106573044 coding downstream 346680 55901897 ~ 56147404 (-)
LOC110525232 NA coding downstream 414301 56069205 ~ 56079783 (-)
LOC110525505 LOC106573040 coding downstream 693045 55744407 ~ 55801039 (-)
LOC110525476 LOC106573024 coding downstream 1365814 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 1459825 54978911 ~ 55034259 (-)
LOC110521481 LOC106573508 coding upstream 40260 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 296212 56791621 ~ 56873384 (-)
cdh23 cdh23 coding upstream 409200 56904609 ~ 57560442 (-)
LOC110525582 fgfr2 coding upstream 1674081 58166565 ~ 58282805 (-)
LOC110532479 ate1 coding upstream 1858236 58353645 ~ 58535096 (-)
G61975 NA non-coding downstream 947 56488406 ~ 56493137 (-)
G61877 NA non-coding downstream 9833 56482665 ~ 56484251 (-)
G61871 NA non-coding downstream 18456 56473369 ~ 56475628 (-)
G61868 NA non-coding downstream 30056 56463384 ~ 56464028 (-)
G61866 NA non-coding downstream 31488 56462391 ~ 56462596 (-)
G62009 NA non-coding upstream 74053 56569462 ~ 56598254 (-)
G62026 NA non-coding upstream 103259 56598668 ~ 56598996 (-)
G62030 NA non-coding upstream 107144 56602553 ~ 56602811 (-)
G62034 NA non-coding upstream 111978 56607387 ~ 56608282 (-)
G62035 NA non-coding upstream 113009 56608418 ~ 56608709 (-)
G61715 NA other downstream 340166 56153430 ~ 56153918 (-)
G61563 NA other downstream 660724 55832825 ~ 55833928 (-)
G60624 NA other downstream 1290342 55203417 ~ 55203742 (-)
G60614 NA other downstream 1300361 55193297 ~ 55193723 (-)
G60572 NA other downstream 1339826 55150241 ~ 55154258 (-)
G61978 NA other upstream 29561 56524970 ~ 56533975 (-)
G63093 NA other upstream 540258 57035667 ~ 57062848 (-)
G63328 NA other upstream 901785 57397194 ~ 57398488 (-)
G65147 NA other upstream 2289333 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 2648964 59144373 ~ 59199471 (-)

Expression


Co-expression Network