G61978


Basic Information

Item Value
gene id G61978
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56524970 ~ 56533975 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68821
gtcatttagttcagttacctttccCTTCTTGAGTATAGGAACATCTTGAAGTGCTAtcgccccacaagggtgcatgctcagctaCTCCTGTAatcccatgactgcatggccatgcacgcaaCCAAATAAATcaacaagtttgcagacgacacaacagtaatgGCCTTGATTACCAACACCGACGAgaccgcctacagggaggaagtgagggcactcggagtgtggtgtcaggaaaacaacctgtcaatcaacgtcaacaaaacaaaggagatgatcgcggactccaggaaacagcagagggagcacccccctatccacatcgacgagacagtagtgaaggtggaacgtttttttaagttcctcggcgtacacatcacagacaaactgaaatggtacacccacacagacagtgtggtgaagaaggctcaacAGAAATGTGGCTTATCACctaaaccctcacaaacctttacagatgcacaattgagagcatcatgTCAGGCtgtaccctccaggacacctacagcacccgatatcacaggaaggccaaaaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacacacggactcaactccagccactttaataatgggaattgatggaaattgatggaaaatatatcactagccactttaaacaatgctacttaatattaatataatgtttaaataccctacattactcatctcatatgtatatgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaaactatgccactttgtttacataccctacattactcatctcatatgtatatactgtactcgataccatctactgcatcttgcctatgccgttctgtaccatcactcattcatgtatctttatgtacatattctttatccctttacacttgtgtgtataaggtagtagtttggaatttttaggttagattactcgttggttattactgcattgtcggaactagaagcacaagcattttctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaatttgatttgatttgatttatctgcCCGGAACAGTTGAAATCCAGATTCATCAGTGAAGagtacacttctccagcgtgccagaggccatcaaaggtgagcgtTTTCCCACTGATGTTGGTTACTACGCCGGACTGCgttcaggtcaagaccctggtgaggacaacaacCACGCAAATGTGCTTCCCTGAGATAggttgtgcagaaattattcagttgtgcgaacccacagtttcatcagctgtctgggtggctgatctcagttgaagaagccggatgtggaggtcctgtgttggcgtggttacacaagGTCTGCGGGTTGTGAGGCAGATTGGACATACTGTTGACGTactgttgcgttcatatttttgttcagtatatttacatTTAAGTTGGTATGTTCTTACCTCTGCGGCCCAAATTTGGCACTGTTGGGCTGTTGTAGTGTCTCACTCCTGGCCCTTTTTGAATCAAtaactgttactgtaatttaattatgccaatgtgctttcatcaattgaaagcccttaatctattttatgagaatttctaagatttcttgtttgcataaaatagacacagaccagtctttcaataataggtaatagaatttattctcggagcgcgctcccACTTAATCACGTGCAGCAGTTTATATACagatcatgacgtcatttcaatgctttaacagaatcccctcctctcaaccGGGACAAAgtaaggtgaaaagttcattctaacttactaacacactcccagataacttttgacccctgaacattatcgatcaccactgaactgacagttttaataacagaaaacctaggaatgcattcactgccttatctaaaaaccccagagctaagtttctgTAGGGTCAACCATAGGCTAACGACCTTATCTGTTTTCACAGTCCACAACCCATAtagttaatcagatataataaaacagagtataagtttacttagttacagttccatttaaaattaTTTGTTCAGTCATATTAATCATAATTTCCTAACAATCCACCCTCAAAATGACTTAACAACTCATGCCATCATTAAACACTACATGGAAATATCAATGATATACTAAAAGAAGACCACCAATACATGTATGTACATAATCAACTTCAATGACTGTTCTATCCTACATCAGAATCTTAATTCTACTTATCAGGATTTTCTGTTAATCTTCATGAAAAAACAGTCTATACATTGAAACAAGAAAACATCTAAATTTCCTAAACATCAAATATGGTCTCCTCGCGAGTGAAAGGATCCGGATTCTTCTATTACGTCCAAGCCATGTATTTTGTATTCCACTGGTCAGAGCTTAGGATTGGACCATATATCACCATCTGAAGTGTCATCGATTTCTCCAGAGTCCTGGAAATGATAACTTTCATACACGCAATCAACCACGTCCGTACAAaactaacacagtcacacaggtgaaGGTAGCCCATAACACAGTAATCATAACATTTTTACTATTCTATTCTGCCAAGTCATTCATTACATCTCTAATATAATTGGTGAAGCGCTGTGGATTTTTAATAGATATAATTGATCCAATCCACATTCTCATTAAGAGTGGACCACCACAAAATACTTGACTCTAATCCTACCAGGATCTAATTTATAGCTTTGATCTCATCTGCCACCCTTGGAACCACAATGTTATTAATACAAACCCTATCATCAAAAGACCCAGTCGAAGTACTTATCTTCTCCCGTTTAGTCAACACCACAACCAACAGATGTGAGCCCTGGGCCTCCTTATCTTACTGAAATCCCCAgatgtcacgagtccgaccgagggtgtttccctttcccgggcaggtggcgctcggcggtcgtcgtcaccggcctattagctgccactgattgtttttccttcccctccttgtatgttgagtggtagcacctgtgaatgtttaattagtttgtctttattagacagccggcccgcctggttgttgtgcgggattatttctatgtaaaccttcggctctgtggtataggcacgtgttagtgtccggtcgggattgtttcccattgtacattttgattccctgtgttttgggaacgtaacgtttttgtgagcaccctgtggtgcattggtgcgattaaaagacgcgcagcattgaactctctgtctcctgcatttgactccacacccacgacacccggagcattacaccAGATCTCAAGAGAGTCTGCCAAAACACTCATTGGTCGTATCAAAAGTAACATTATCTGTCCTATTGCAGTACTGATTTTGCCCCACATATTTCCCAGGAGTACTATACTGAATCAAACAATAAACAGTCTCCCGTTGCCTCTGTGAAAGGAGGAAGCTCAGATTTCAGAGGAACATGTGGATATAAATAGTGCAAATCCATACAACATATTATCTGGCTTTCCTGCTTCCATGAATAGCTTTACCATACAGGTTGTTCCCTTGGTTGAATAATTCCATTTCTGAACTATCCACACCGGCTCTTGGCTCTGGACAACTCCACAGTCAGTATCTGTTTTGTCAGGGACTCTGCTTGTATTCTGCTGACTATAGAGCAATCAGCTGCTCTAACTTTTTCTACCTGGAATGCACTAGGTTATCAACTGAAACCCTTACTTTCACTaccctccatctccttccatgCTGGGTATGTAGATTTATGTAGCCTTCTCACATGATGTGAGCTATAACATGTTCCATAATAGCTACTCTTAGTCCTGAACTGCCAAGGAGTCAGAGACATCACTTGGTCTACATAGAACTTCACTGAGACATCCCTCCCTATCCTACTCTCACCTCCTGTTTATCCAGATCAAGTGATCTCTTATGCTTGGTTAATACTAATTTCTCCTTGTTTAATTATGTCAATATTACCCTCTGGCCTTCTCGGGTTCATGGTGTAGGAATAAGGTCTCCAACCATACAGCTTAGGATGGACAGCTCACCTATAAAGCCACACCCTCTTCCAGAAAACACATCATTAGCAAGAGTCAGACACATTTTCACTTCTATGAACAAGAACAGTGAGGAAAGGACAGGTAAGGTATTTttcattcgagagatggcccccAGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68821 True 4309 TUCP 0.42 2 56524970 56533975

Neighbor

gene id symbol gene type direction distance location
LOC110525190 LOC106573044 coding downstream 377566 55901897 ~ 56147404 (-)
LOC110525232 NA coding downstream 445187 56069205 ~ 56079783 (-)
LOC110525505 LOC106573040 coding downstream 723931 55744407 ~ 55801039 (-)
LOC110525476 LOC106573024 coding downstream 1396700 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 1490711 54978911 ~ 55034259 (-)
LOC110521481 LOC106573508 coding upstream 1694 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 257646 56791621 ~ 56873384 (-)
cdh23 cdh23 coding upstream 370634 56904609 ~ 57560442 (-)
LOC110525582 fgfr2 coding upstream 1635515 58166565 ~ 58282805 (-)
LOC110532479 ate1 coding upstream 1819670 58353645 ~ 58535096 (-)
G61976 NA non-coding downstream 29561 56494084 ~ 56495409 (-)
G61975 NA non-coding downstream 31833 56488406 ~ 56493137 (-)
G61877 NA non-coding downstream 40719 56482665 ~ 56484251 (-)
G61871 NA non-coding downstream 49342 56473369 ~ 56475628 (-)
G61868 NA non-coding downstream 60942 56463384 ~ 56464028 (-)
G62009 NA non-coding upstream 35487 56569462 ~ 56598254 (-)
G62026 NA non-coding upstream 64693 56598668 ~ 56598996 (-)
G62030 NA non-coding upstream 68578 56602553 ~ 56602811 (-)
G62034 NA non-coding upstream 73412 56607387 ~ 56608282 (-)
G62035 NA non-coding upstream 74443 56608418 ~ 56608709 (-)
G61715 NA other downstream 371052 56153430 ~ 56153918 (-)
G61563 NA other downstream 691610 55832825 ~ 55833928 (-)
G60624 NA other downstream 1321228 55203417 ~ 55203742 (-)
G60614 NA other downstream 1331247 55193297 ~ 55193723 (-)
G60572 NA other downstream 1370712 55150241 ~ 55154258 (-)
G63093 NA other upstream 501692 57035667 ~ 57062848 (-)
G63328 NA other upstream 863219 57397194 ~ 57398488 (-)
G65147 NA other upstream 2250767 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 2610398 59144373 ~ 59199471 (-)
LOC110526097 LOC106576849 other upstream 3896232 60430184 ~ 60495300 (-)

Expression


Co-expression Network