G62009


Basic Information

Item Value
gene id G62009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56569462 ~ 56598254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68862
taaaactgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaacggaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttacaaaacagctcgagctcagtgaggttggatggagagcatttgtgaatagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagatttagctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaacagcaggcccaaaccatgatgctaccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttaaatttttgtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatctgtcttctccttgtatgagctgaaagtttagagg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68862 True 985 lncRNA 0.37 2 56569462 56598254

Neighbor

gene id symbol gene type direction distance location
LOC110521481 LOC106573508 coding downstream 25164 56535669 ~ 56544298 (-)
LOC110525190 LOC106573044 coding downstream 422058 55901897 ~ 56147404 (-)
LOC110525232 NA coding downstream 489679 56069205 ~ 56079783 (-)
LOC110525505 LOC106573040 coding downstream 768423 55744407 ~ 55801039 (-)
LOC110525476 LOC106573024 coding downstream 1441192 55071579 ~ 55128270 (-)
smoc2 smoc2 coding upstream 193367 56791621 ~ 56873384 (-)
cdh23 cdh23 coding upstream 306355 56904609 ~ 57560442 (-)
LOC110525582 fgfr2 coding upstream 1571236 58166565 ~ 58282805 (-)
LOC110532479 ate1 coding upstream 1755391 58353645 ~ 58535096 (-)
LOC110525605 LOC106576888 coding upstream 1966976 58565230 ~ 58569247 (-)
G61976 NA non-coding downstream 74053 56494084 ~ 56495409 (-)
G61975 NA non-coding downstream 76325 56488406 ~ 56493137 (-)
G61877 NA non-coding downstream 85211 56482665 ~ 56484251 (-)
G61871 NA non-coding downstream 93834 56473369 ~ 56475628 (-)
G61868 NA non-coding downstream 105434 56463384 ~ 56464028 (-)
G62026 NA non-coding upstream 414 56598668 ~ 56598996 (-)
G62030 NA non-coding upstream 4299 56602553 ~ 56602811 (-)
G62034 NA non-coding upstream 9133 56607387 ~ 56608282 (-)
G62035 NA non-coding upstream 10164 56608418 ~ 56608709 (-)
G62042 NA non-coding upstream 22516 56620770 ~ 56621485 (-)
G61978 NA other downstream 35487 56524970 ~ 56533975 (-)
G61715 NA other downstream 415544 56153430 ~ 56153918 (-)
G61563 NA other downstream 736102 55832825 ~ 55833928 (-)
G60624 NA other downstream 1365720 55203417 ~ 55203742 (-)
G60614 NA other downstream 1375739 55193297 ~ 55193723 (-)
G63093 NA other upstream 437413 57035667 ~ 57062848 (-)
G63328 NA other upstream 798940 57397194 ~ 57398488 (-)
G65147 NA other upstream 2186488 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 2546119 59144373 ~ 59199471 (-)
LOC110526097 LOC106576849 other upstream 3831953 60430184 ~ 60495300 (-)

Expression


Co-expression Network