Gene
RNA
| Item | Value |
|---|---|
| gene id | G62042 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 56620770 ~ 56621485 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68900 | True | 716 | lncRNA | 0.43 | 1 | 56620770 | 56621485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521481 | LOC106573508 | coding | downstream | 76472 | 56535669 ~ 56544298 (-) |
| LOC110525190 | LOC106573044 | coding | downstream | 473366 | 55901897 ~ 56147404 (-) |
| LOC110525232 | NA | coding | downstream | 540987 | 56069205 ~ 56079783 (-) |
| LOC110525505 | LOC106573040 | coding | downstream | 819731 | 55744407 ~ 55801039 (-) |
| LOC110525476 | LOC106573024 | coding | downstream | 1492500 | 55071579 ~ 55128270 (-) |
| smoc2 | smoc2 | coding | upstream | 170136 | 56791621 ~ 56873384 (-) |
| cdh23 | cdh23 | coding | upstream | 283124 | 56904609 ~ 57560442 (-) |
| LOC110525582 | fgfr2 | coding | upstream | 1548005 | 58166565 ~ 58282805 (-) |
| LOC110532479 | ate1 | coding | upstream | 1732160 | 58353645 ~ 58535096 (-) |
| LOC110525605 | LOC106576888 | coding | upstream | 1943745 | 58565230 ~ 58569247 (-) |
| G62035 | NA | non-coding | downstream | 12061 | 56608418 ~ 56608709 (-) |
| G62034 | NA | non-coding | downstream | 12488 | 56607387 ~ 56608282 (-) |
| G62030 | NA | non-coding | downstream | 17959 | 56602553 ~ 56602811 (-) |
| G62026 | NA | non-coding | downstream | 21774 | 56598668 ~ 56598996 (-) |
| G62009 | NA | non-coding | downstream | 22516 | 56569462 ~ 56598254 (-) |
| G62044 | NA | non-coding | upstream | 306 | 56621791 ~ 56622004 (-) |
| G62064 | NA | non-coding | upstream | 19223 | 56640708 ~ 56640930 (-) |
| G62236 | NA | non-coding | upstream | 23603 | 56645088 ~ 56645508 (-) |
| G62265 | NA | non-coding | upstream | 61673 | 56683158 ~ 56702331 (-) |
| G62314 | NA | non-coding | upstream | 131733 | 56753218 ~ 56774399 (-) |
| G61978 | NA | other | downstream | 86795 | 56524970 ~ 56533975 (-) |
| G61715 | NA | other | downstream | 466852 | 56153430 ~ 56153918 (-) |
| G61563 | NA | other | downstream | 787410 | 55832825 ~ 55833928 (-) |
| G60624 | NA | other | downstream | 1417028 | 55203417 ~ 55203742 (-) |
| G60614 | NA | other | downstream | 1427047 | 55193297 ~ 55193723 (-) |
| G63093 | NA | other | upstream | 414182 | 57035667 ~ 57062848 (-) |
| G63328 | NA | other | upstream | 775709 | 57397194 ~ 57398488 (-) |
| G65147 | NA | other | upstream | 2163257 | 58784742 ~ 58785617 (-) |
| LOC110525695 | LOC106576879 | other | upstream | 2522888 | 59144373 ~ 59199471 (-) |
| LOC110526097 | LOC106576849 | other | upstream | 3808722 | 60430184 ~ 60495300 (-) |
