Gene
RNA
| Item | Value |
|---|---|
| gene id | G62400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 56882743 ~ 56882958 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69273 | True | 216 | lncRNA | 0.41 | 1 | 56882743 | 56882958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smoc2 | smoc2 | coding | downstream | 9359 | 56791621 ~ 56873384 (-) |
| LOC110521481 | LOC106573508 | coding | downstream | 338445 | 56535669 ~ 56544298 (-) |
| LOC110525190 | LOC106573044 | coding | downstream | 735339 | 55901897 ~ 56147404 (-) |
| LOC110525232 | NA | coding | downstream | 802960 | 56069205 ~ 56079783 (-) |
| LOC110525505 | LOC106573040 | coding | downstream | 1081704 | 55744407 ~ 55801039 (-) |
| cdh23 | cdh23 | coding | upstream | 21651 | 56904609 ~ 57560442 (-) |
| LOC110525582 | fgfr2 | coding | upstream | 1286532 | 58166565 ~ 58282805 (-) |
| LOC110532479 | ate1 | coding | upstream | 1470687 | 58353645 ~ 58535096 (-) |
| LOC110525605 | LOC106576888 | coding | upstream | 1682272 | 58565230 ~ 58569247 (-) |
| habp2 | habp2 | coding | upstream | 1708149 | 58591107 ~ 58599375 (-) |
| G62314 | NA | non-coding | downstream | 108344 | 56753218 ~ 56774399 (-) |
| G62265 | NA | non-coding | downstream | 180412 | 56683158 ~ 56702331 (-) |
| G62236 | NA | non-coding | downstream | 237235 | 56645088 ~ 56645508 (-) |
| G62064 | NA | non-coding | downstream | 241813 | 56640708 ~ 56640930 (-) |
| G62044 | NA | non-coding | downstream | 260739 | 56621791 ~ 56622004 (-) |
| G62404 | NA | non-coding | upstream | 1251 | 56884209 ~ 56884429 (-) |
| G63014 | NA | non-coding | upstream | 25303 | 56908261 ~ 56908564 (-) |
| G63102 | NA | non-coding | upstream | 135306 | 57018264 ~ 57018486 (-) |
| G63104 | LOC100194703 | non-coding | upstream | 136211 | 57019169 ~ 57019430 (-) |
| G63108 | NA | non-coding | upstream | 142733 | 57025691 ~ 57025996 (-) |
| G61978 | NA | other | downstream | 348768 | 56524970 ~ 56533975 (-) |
| G61715 | NA | other | downstream | 728825 | 56153430 ~ 56153918 (-) |
| G61563 | NA | other | downstream | 1049383 | 55832825 ~ 55833928 (-) |
| G60624 | NA | other | downstream | 1679001 | 55203417 ~ 55203742 (-) |
| G60614 | NA | other | downstream | 1689020 | 55193297 ~ 55193723 (-) |
| G63093 | NA | other | upstream | 152709 | 57035667 ~ 57062848 (-) |
| G63328 | NA | other | upstream | 514236 | 57397194 ~ 57398488 (-) |
| G65147 | NA | other | upstream | 1901784 | 58784742 ~ 58785617 (-) |
| LOC110525695 | LOC106576879 | other | upstream | 2261415 | 59144373 ~ 59199471 (-) |
| LOC110526097 | LOC106576849 | other | upstream | 3547249 | 60430184 ~ 60495300 (-) |
