G62415


Basic Information

Item Value
gene id G62415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 56911606 ~ 56911817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU69288
CAATTACAGATCTTACACTGTGCGATAGTACCAGTTCGTAAAGATGAACAACATGGCTGCCAAGAAGAGCAACACAGCTAGGATAATGATGGCCATCTGTAGCGTTGTGAGGTCATCAGGTGCTCTCCTGCTGATGGCAGGCTGGACGTCCAGGATGTTGTAATTCCTGAACAGGTTCCTCAGCTGGTCCTTGTTCTCATCAATCATCTGAA

Function

NR:

description
LOW QUALITY PROTEIN: cadherin-23-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69288 True 212 lncRNA 0.47 1 56911606 56911817

Neighbor

gene id symbol gene type direction distance location
eif3s6ip LOC106576896 coding upstream 7380 56894252 ~ 56904226 (+)
LOC110525521 LOC106576899 coding upstream 314953 56551748 ~ 56596653 (+)
LOC118964919 NA coding upstream 886693 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 1081420 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 1173189 55674086 ~ 55738417 (+)
vsir cssa18h10orf54 coding downstream 123791 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 710450 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 782681 57694498 ~ 57722025 (+)
wdr11 wdr11 coding downstream 894317 57806134 ~ 57940604 (+)
LOC110525578 NA coding downstream 1049899 57961716 ~ 57963823 (+)
G62414 NA non-coding upstream 1231 56910168 ~ 56910375 (+)
G62406 NA non-coding upstream 23238 56888123 ~ 56888368 (+)
G62405 NA non-coding upstream 24152 56887194 ~ 56887454 (+)
G62230 NA non-coding upstream 37010 56874381 ~ 56874596 (+)
G62062 NA non-coding upstream 271071 56640266 ~ 56640535 (+)
G62447 NA non-coding downstream 48582 56960399 ~ 57012732 (+)
G62501 NA non-coding downstream 104550 57016367 ~ 57016865 (+)
G62504 NA non-coding downstream 107625 57019442 ~ 57019752 (+)
G62520 cdh23 non-coding downstream 156023 57067840 ~ 57068054 (+)
G62524 NA non-coding downstream 164851 57076668 ~ 57076895 (+)
G61806 NA other upstream 659591 56249888 ~ 56252015 (+)
G61804 NA other upstream 663836 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 881235 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 988230 55905508 ~ 55923376 (+)
G59963 NA other upstream 2190143 54721188 ~ 54721463 (+)
G63958 NA other downstream 1254748 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1309705 58221522 ~ 58223130 (+)
G64292 NA other downstream 1675041 58586858 ~ 58587585 (+)
G64315 NA other downstream 1753517 58665334 ~ 58665906 (+)
G64338 NA other downstream 1787479 58699296 ~ 58700379 (+)

Expression


Co-expression Network