G63093


Basic Information

Item Value
gene id G63093
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 57035667 ~ 57062848 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU70000
GTTTAAGAGCGCCGATTTATTATAGAAAAAAATTACATCAGcattttatttcattatttttggGAAAGGCTTTATTTCATATGGTGTTGCCAAAGCTGCTGCTGTTTGgctattacacacacacgcacacacacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacactactaattTCAGGGTGGTTTTTTTTACAATTCACTGAACACCCCTTATCTAATATCTACAGTAGTATTCGATTATGTATACTTACAGATAGATAAACATAAAGATAACAAATAATCAAGTATAAGCACAAAATATGCCAAAGGATATCACAAAACAGTAAACACAAGAACACCATGGAATAAACACGTTGGTCATCTTGGCAGTGAAGGCATTTGGCTCGTTGAGTTTGGGTTACTAGATCCATCCACTAGCCAAAATTGACACTTCTCTTCAAAAACAGACCATCCAGCATAGCAATATATCTCTAATATTTATTTGACAGTTTCTAGTACTGGTTGAATATTTGGACATTGTTACGTGCAGAGAAGGGTGTGGGAAGGAATAAGAGCGAGGAAAgggaagggatggaggggggtTACAGAAACACAGTATTTTAGGTAGTGAAATATATAAAAGGGGAAAGAGGAACAACACAAGAATGGGACGTTTAGAtaaataaaagtggggctttggTCTCGTTACAACAGCTCAGTGAAACACATTTTTAGAAACAATTGTTTAAGGCTGGTTGGAAATGGCCTTAAAAGACTACTGTCAGCACATGGGTACCTCTTACTACCCTGATCACTTTGGCACAAGCAAATGTGCTGAATATGCATATCAGAGCCATAGGAAGAGGGAATCATCATAGAAAGAAGTAGAACACTATGGGCCAGTTTCCAGGACACAGATAAAGCTAATGGTGTTGGACTAAGaagcactttcaatggagaatctccatttaATTGTGTCCCTCTTTTTTAGATTTAGTCTAGTCTTAGTAATTTTGACAAAAATATTACGTcttagtaaaacatttttttaataatgatTTAATCTAGTTATTGTCAAAATGAAGAAAACAATGGGCCATTTTAGTCAACTAAATGCTCTTTCATTTTATTCACATAATTCATATTGCAtagatatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaagtcccaGTGCTCGAGTCACTGGGTGCACATTAACTCTATTTACCGAGTCAGATATAGGTGTAGTGGCAAGAAGAATTTAGTCAATCAATTTTTTGCAATCCCTTTCTTCTTTTCTTTCTGTGCCACCGAATGTTTGCATATACAGTGGGCTACTGGTAATACCAGAGCCACGTTCAGTAGAAAAATgtcagaggcatgtttgttctacatagcatatttctatctgaacattccAAAAAGTTTCATACTGCTGAACGAGCCCCAGTTtgttagctatagctagctattgaggtaacatgactgaacaaggtGTAGTCTAAACAAATGGTTAACGGTCTGGTCCGCAAGTAGCCTACTTTTAGCACGGCCCACAATATTCTTTATGAATATAAAATGCAACCCGCCAATGCACAATAAAAAGAAACAACATAGAGCTGGGTCATATCTTTTGAACAGTAAGGGCTAGCATCAAGCGTTTTGtctgaggaaaagagggagacttGGCTACAGAACCTGCCTATGAAAGGCAGTGGGGAAGGTGGGAGGGTTGCGCGAAGACTACAAATTCAAAAAACAGCTTACTTTTCTCTACTCAAGGAAGAGAAGAACATCGCTAGACTGTAGTTGCACTGTTCAACTCAATGCTGCTATTGTTTTACATTTTGTAAAGCAGCTTGTGTTTCTTAACCAGGCAAAGGGTAGCTGACTAGAATGCTAGTGGTGACTGGTTAGCTACGGGAAATTAAGAAGAGTTGCCTGCGCAATGTCGGGAAATTAAGAAGAGTTGCCTGCGCAATGTGTCTAATCGAAGACGGAGCTGGAGCGAAGCCTGTCCACACTCATCGCTTGCTCCCCCCCAGCTCACCAGCTGATGGAGGTTGTGTGTGCCGGGTGTGGTGCATCCTTCCCACTGCTGAAAATAACTACATCTGTCCTGCTAATATTAATTGTGCTTATCACTGAAAAGTGCTAGATTTGTTCAAAAACGTTCAAAAACGATTGTCCTGTCCACTAAAGAGTCTACGATTGTCCTGTCCACTACAGAGATAGGTAGATGTTGTCGTGTCTCATTTTAGTCAACTGTATTGAAAAATCACTTTCGTTCAGTTCGTTTTTTCTAGGTCTGTCTAGTCAGTCTCGTcaattgccactgaaaaataGGTTTGTCAAATATTAGTGGAAAACAAATGTCTAAACCAAAGTTTACACTGTTTTCTGTCTAGATTGatgcttaatctgtgtccggggaACGGGCCCTATATGGGGGAAAATGGTGAGGGAAATGGTGAGGAGCATATCATCAAGAGTCCACAGGAGTTGCTTTGTATCCTCTACCGCCCACCCTGCACCCACACTCCCCCCATCCTCCTCAGTACAGTCCTGGGACATCAGATCAGGAGCACCTGCTGGTCCTTGAGCTGTCGTCAGTGGTCAGACGGTGCGTCACATACTTAGCGGGCCCCCACTGCAACACAAGTGTCGAgaacaaatcccccccccccctctttggcCTCCTCCAGTTGTTGTTGCAGGTGGAACATTTATTTTAGAAGAAActgtcccctccttccctctcccatcCATCCAGGATgcggtacacagagagagagagctcccccAGCAGAGAAGGTTGTGAGACAGGCTTCAGGGTGACATGGCAGAGTGACGATGAATAACTAACCACAAGGTGTTTCTGGGTTAGGGAGCCATTGACTGCTTCTCTCTACACATGCAGGAAATCAGGAGACTCTAGGATGGGATCCTGTTCTGGGAAGAAGACAACTCCGTGTGCGGGAGGAGATAGGGGGGTGCCAGGGTCGGACAGTAGCAGGTGTCGGCCTGTCTCTGAGGACTGCCTGGTCATGATTTGAGACACAGTCCTGGTCTTAGCCTGGCCTGGGGGTGAGACCCCCAGAAATACTGGGTTCTCATGGCCCGCAGCTTCaCTGTCCATTCTCACCAGCTCGTGTGCACGTTGGCTGGACTGGGCGGATTGTCTTTGCTTGTACACTAACACCATGATGATGGGCAAAGAGAGAATAGCCATGATGCAAGCAGCTGTGGCCAGGCCTGCAGTCACTGACCCTGAGGATACTTCTGCTGGCTTGATGTCCAATAGAGTGCATTTCGCCTCATCTCTTTTccGAGGTGTGATAGTGAGAAAGATGTGGCTATGCGTCCTCTGCACCACCTTGCCATTGTTAATATCCAGGGAGAGGCAGCAGTAACGCCCTTGGTCAGAATTGTTCACAAGCTGTAGTTGCACCCAGAAAGACTCTTCGCTTGCCCCGTACTTTACCCCCCAAGGAAGCGCCGCACTGGAATGGTTGCCCCGGTGATTGTGTTCGCGGGGGTGCACCTTGTCATGGCAATGCTCAGCTGAGTGGGGGGTGAAAAGCCAGCTTTGATGCAGGTGGTCCGAGGGGTGCAGCTTGGCACCTTTCTGGGCACAGAGCAGGGTGACATTGGCACCCACCTCGCACATGTAGGAAAGGTGGGGGGCATTGACAGTCAGGCGGGTGTGAGGATGGGCCACGTCTCCATTGGCTCCAACCACGGTCGCCAGGTGAAAATAGAGCAGAAACCTCAGCAGCAAATGGATCCGTAAAGTTTCTCTGCTGTATAATTCCCACGTCATTATTGTCTTCTGTCGCCTATGTAGCCTACTTTTTAATATTGATCTTCcttcaaacatattttttttgctCTGCTGATACGTTAATTATTTTAACTGCGTTGGAATAACAATCTTTGACACGTGACACTTTATGCTACAATGTCACTAGTAAAAGTAAGTTACAAGTAGTCCTACCAAATTTTTGTGACTTGATGTCTTGCAGGAGG
>TU69997
GTTTAAGAGCGCCGATTTATTATAGAAAAAAATTACATCAGcattttatttcattatttttggGAAAGGCTTTATTTCATATGGTGTTGCCAAAGCTGCTGCTGTTTGgctattacacacacacgcacacacacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacactactaattTCAGGGTGGTTTTTTTTACAATTCACTGAACACCCCTTATCTAATATCTACAGTAGTATTCGATTATGTATACTTACAGATAGATAAACATAAAGATAACAAATAATCAAGTATAAGCACAAAATATGCCAAAGGATATCACAAAACAGTAAACACAAGAACACCATGGAATAAACACGTTGGTCATCTTGGCAGTGAAGGCATTTGGCTCGTTGAGTTTGGGTTACTAGATCCATCCACTAGCCAAAATTGACACTTCTCTTCAAAAACAGACCATCCAGCATAGCAATATATCTCTAATATTTATTTGACAGTTTCTAGTACTGGTTGAATATTTGGACATTGTTACGTGCAGAGAAGGGTGTGGGAAGGAATAAGAGCGAGGAAAgggaagggatggaggggggtTACAGAAACACAGTATTTTAGGTAGTGAAATATATAAAAGGGGAAAGAGGAACAACACAAGAATGGGACGTTTAGAtaaataaaagtggggctttggTCTCGTTACAACAGCTCAGTGAAACACATTTTTAGAAACAATTGTTTAAGGCTGGTTGGAAATGGCCTTAAAAGACTACTGTCAGCACATGGGTACCTCTTACTACCCTGATCACTTTGGCACAAGCAAATGTGCTGAATATGCATATCAGAGCCATAGGAAGAGGGAATCATCATAGAAAGAAGTAGAACACTATGGGCCAGTTTCCAGGACACAGATAAAGCTAATGGTGTTGGACTAAGaagcactttcaatggagaatctccatttaATTGTGTCCCTCTTTTTTAGATTTAGTCTAGTCTTAGTAATTTTGACAAAAATATTACGTcttagtaaaacatttttttaataatgatTTAATCTAGTTATTGTCAAAATGAAGAAAACAATGGGCCATTTTAGTCAACTAAATGCTCTTTCATTTTATTCACATAATTCATATTGCAtagatatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaagtcccaGTGCTCGAGTCACTGGGTGCACATTAACTCTATTTACCGAGTCAGATATAGGTGTAGTGGCAAGAAGAATTTAGTCAATCAATTTTTTGCAATCCCTTTCTTCTTTTCTTTCTGTGCCACCGAATGTTTGCATATACAGTGGGCTACTGGTAATACCAGAGCCACGTTCAGTAGAAAAATgtcagaggcatgtttgttctacatagcatatttctatctgaacattccAAAAAGTTTCATACTGCTGAACGAGCCCCAGTTtgttagctatagctagctattgaggtaacatgactgaacaaggtGTAGTCTAAACAAATGGTTAACGGTCTGGTCCGCAAGTAGCCTACTTTTAGCACGGCCCACAATATTCTTTATGAATATAAAATGCAACCCGCCAATGCACAATAAAAAGAAACAACATAGAGCTGGGTCATATCTTTTGAACAGTAAGGGCTAGCATCAAGCGTTTTGtctgaggaaaagagggagacttGGCTACAGAACCTGCCTATGAAAGGCAGTGGGGAAGGTGGGAGGGTTGCGCGAAGACTACAAATTCAAAAAACAGCTTACTTTTCTCTACTCAAGGAAGAGAAGAACATCGCTAGACTGTAGTTGCACTGTTCAACTCAATGCTGCTATTGTTTTACATTTTGTAAAGCAGCTTGTGTTTCTTAACCAGGCAAAGGGTAGCTGACTAGAATGCTAGTGGTGACTGGTTAGCTACGGGAAATTAAGAAGAGTTGCCTGCGCAATGTCGGGAAATTAAGAAGAGTTGCCTGCGCAATGTGTCTAATCGAAGACGGAGCTGGAGCGAAGCCTGTCCACACTCATCGCTTGCTCCCCCCCAGCTCACCAGCTGATGGAGGTTGTGTGTGCCGGGTGTGGTGCATCCTTCCCACTGCTGAAAATAACTACATCTGTCCTGCTAATATTAATTGTGCTTATCACTGAAAAGTGCTAGATTTGTTCAAAAACGTTCAAAAACGATTGTCCTGTCCACTAAAGAGTCTACGATTGTCCTGTCCACTACAGAGATAGGTAGATGTTGTCGTGTCTCATTTTAGTCAACTGTATTGAAAAATCACTTTCGTTCAGTTCGTTTTTTCTAGGTCTGTCTAGTCAGTCTCGTcaattgccactgaaaaataGGTTTGTCAAATATTAGTGGAAAACAAATGTCTAAACCAAAGTTTACACTGTTTTCTGTCTAGATTGatgcttaatctgtgtccggggaACGGGCCCTATATGGGGGAAAATGGTGAGGGAAATGGTGAGGAGCATATCATCAAGAGTCCACAGGAGTTGCTTTGTATCCTCTACCGCCCACCCTGCACCCACACTCCCCCCATCCTCCTCAGTACAGTCCTGGGACATCAGATCAGGAGCACCTGCTGGTCCTTGAGCTGTCGTCAGTGGTCAGACGGTGCGTCACATACTTAGCGGGCCCCCACTGCAACACAAGTGTCGAgaacaaatcccccccccccctctttggcCTCCTCCAGTTGTTGTTGCAGGTGGAACATTTATTTTAGAAGAAActgtcccctccttccctctcccatcCATCCAGGATgcggtacacagagagagagagctcccccAGCAGAGAAGGTTGTGAGACAGGCTTCAGGGTGACATGGCAGAGTGACGATGAATAACTAACCACAAGGTGTTTCTGGGTTAGGGAGCCATTGACTGCTTCTCTCTACACATGCAGGAAATCAGGAGACTCTAGGATGGGATCTGTTCTGGGAAGAAGACAACTCCGTGTGCGGGAGGAGATAGGGGGGTGCCAGGGTCGGACAGTAGCAGGTGTCGGCCTGTCTCTGAGGACTGCCTGGTCATGATTTGAGACACAGTCCTGGTCTTAGCCTGGCCTGGGGGTGAGACCCCCAGAAATACTGGGTTCTCATGGCCCGCAGCTTCactgaggagagacacacacaggggagagggAAGAAACTACCAGATAGATGTATACagaaaacatatacagtattgtATAGTACACAACTGCTATCcgatacatacagtattatattaaGTGTAAACTCCCTCTGTGCAGTGCACTTCATCAGTCCCAATTCAAGTACATTATTTTTACATTCCTCCAGTTGTATGAGTCGGTGAGTGCACATTTACAAGTTCTCAAGACATTGCATACTTATATCAAGAGTTGACTATACAtgaatacacacatactgtacataacagTGTGATTACCACTTTGTATCTGTGTTATCAACAGCGTTATGGAAGTATGTATGTGGTTAGTTTTAGCCTAATGTCAGAGGGAAGCCATAGCTGTCGTCTGGGCTGTGCAAAACTCAACTCACCTGTCCATTCTCACCAGCTCGTGTGCACCTGGGAGGGGGAAAGGGAAATGGCCCATTATCAGACAACAAAGCAGTGTGCTAAATCTATGCATGTTTATTCCCTAATGTCATACTTGCTAGTGTAGAGGAAATGAgtttaaactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgttgcacGCGTGCATGTATGTCTTTGTTACTCACGTTGGCTGGACTGGGCGGATTGTCTTTGCTTGTACACTAACACCATGATGATGGGCAAAGAGAGAATAGCCATGATGCAAGCAGCTGTGGCCAGGCCTGCAGTCACTGACCCTGAGGATACTGTAAATAGACCAGGGGCAAAATTAACCTCAAAGAGCATTTTACTTAGCctgatggaaccagcctgatcgccGTGTCCACCATTCTATTTCCATTCTATGTCAGTCTAAACTTCTTCCTCATTGAAACAGTTTGAGCCTGTAATGAGGGGCATTATTTAAAACTAACTGATCTGTGGTTGGATCTCTTTCAACCAACCAGAGGACAGCCTAATTCAACGCACATGTCGGATTTTGTCCTAAACCCACCCATTGTTTCTGAGAGGATGCTGATTGGCCCCTTTATACCAAACACCCATCtttagtccgcaaaaacactacagtgaatactacagtaaagtcagcAGAAACATTACAGTGACaactatagtatttataccaactcattggccttgtggttagagtgtctgCGCTGAGAATGGAAGGTTGTGAGTCCAATCCCTGGCCGAGTCATACCAAATACTATAAAAATAGGATCTGATGcatctctgcttggcactcagcgTTAAGGAAATGGATTGGGGGCAAGGCCATACAATacactagcgtcctgtccagtgGGTGTACTTGtccatcaagctgcctcacgctacagaaacagtaGATGGGCTCCTGCCTTTTGAGCCATTCCGTCCTGCACAAGTTACTTAATTACTTATTTACACACTATATAGCATTTTTTTGTATAGGCAggtgactccaataatcaactaatcatgaccttaggtttagaatgcaattagtttaatcagctttgcttgctagggatggggaaaaagtgtgacaccactcCGGCGcccaaggactggagttgcccatccctgtgcTGGAGGCAGGTACAATTGTCCATGTGAATAAAGTATACCTTCTGCTGGCTTGATGTCCAATAGAGTGCATTTCGCCTCATCTCTTTTccctacagagagatgaggagacaTACAAGacagtttagcattttaaatGTCATGATAAGAATTGACTCGTAGTTGcaccgtgcacacacacacacaaatattaaaCAATTGACAGACGTgaattcaaacacacacaaaaactcaAAACACACATTTtcgctctcactctttctctctctctctctcacacgcacgcacgcacgcacgcacgcacgcacgcacacacacacacacacacacacacacacacacacacacacacacagtgacacacacacacacatggccttACGAGGTGTGATAGTGAGAAAGATGTGGCTATGCGTCCTCTGCACCACCTTGCCATTGTTAATATCCAGGGAGAGGCAGCAGTAACGCCCTTGGTCAGAATTGTTCACAAGCTGTAGTTGCACCCAGAAAGACTCTTCGCTTGCCCCGTACTTTACCCCCCAAGGAAGCGCCGCACTGGAATGGTTGCCCCGGTGATTGTGTTCGCGGGGGTGCACCTTGTCATGGCAATGCTCAGCTGAGTGGGGGGTGAAAAGCCAGCTTTGATGCAGGTGGTCCGAGGGGTGCAGCTTGGCACCTTTCTGGGCACAGAGCAGGGTGACATTGGCACCCACCTCGCACATGTAGGAAAGGTGGGGGGCATTGACAGTCAGGCGGGTGTGAGGATGGGCCACGTC
>TU69999
GTTTAAGAGCGCCGATTTATTATAGAAAAAAATTACATCAGcattttatttcattatttttggGAAAGGCTTTATTTCATATGGTGTTGCCAAAGCTGCTGCTGTTTGgctattacacacacacgcacacacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacagtgacacacacacacacatggccttACGAGGTGTGATAGTGAGAAAGATGTGGCTATGCGTCCTCTGCACCACCTTGCCATTGTTAATATCCAGGGAGAGGCAGCAGTAACGCCCTTGGTCAGAATTGTTCACAAGCTGTAGTTGCACCCAGAAAGACTCTTCGCTTGCCCCGTACTTTACCCCCCAAGGAAGCGCCGCACTGGAATGGTTGCCCCGGTGATTGTGTTCGCGGGGGTGCACCTTGTCATGGCAATGCTCAGCTGAGTGGGGGGTGAAAAGCCAGCTTTGATGCAGGTGGTCCGAGGGGTGCAGCTTGGCACCTTTCTGGGCACAGAGCAGGGTGACATTGGCACCCACCTCGCACATGTAGGAAAGGTGGGGGGCATTGACAGTCAGGCGGGTGTGAGGATGGGCCACGTC

Function

NR:

description
V-type immunoglobulin domain-containing suppressor of T-cell activation

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU70000 False 4099 TUCP 0.44 7 57035667 57062848
TU69997 False 5549 TUCP 0.44 2 57052098 57062848
TU69999 True 612 lncRNA 0.41 2 57052098 57062848

Neighbor

gene id symbol gene type direction distance location
smoc2 smoc2 coding downstream 178714 56791621 ~ 56873384 (-)
LOC110521481 LOC106573508 coding downstream 507800 56535669 ~ 56544298 (-)
LOC110525190 LOC106573044 coding downstream 904694 55901897 ~ 56147404 (-)
LOC110525232 NA coding downstream 972315 56069205 ~ 56079783 (-)
LOC110525505 LOC106573040 coding downstream 1251059 55744407 ~ 55801039 (-)
LOC110525582 fgfr2 coding upstream 1106642 58166565 ~ 58282805 (-)
LOC110532479 ate1 coding upstream 1290797 58353645 ~ 58535096 (-)
LOC110525605 LOC106576888 coding upstream 1502382 58565230 ~ 58569247 (-)
habp2 habp2 coding upstream 1528259 58591107 ~ 58599375 (-)
LOC110525652 LOC106576887 coding upstream 1536312 58599160 ~ 58613936 (-)
G63110 NA non-coding downstream 17674 57027733 ~ 57034424 (-)
G63108 NA non-coding downstream 26102 57025691 ~ 57025996 (-)
G63104 LOC100194703 non-coding downstream 32668 57019169 ~ 57019430 (-)
G63102 NA non-coding downstream 33612 57018264 ~ 57018486 (-)
G63014 NA non-coding downstream 143534 56908261 ~ 56908564 (-)
G63168 NA non-coding upstream 74742 57137590 ~ 57137801 (-)
G63202 NA non-coding upstream 137285 57200133 ~ 57200464 (-)
G63206 NA non-coding upstream 148981 57211829 ~ 57212061 (-)
G63208 NA non-coding upstream 150822 57213670 ~ 57213899 (-)
G63213 NA non-coding upstream 157669 57220517 ~ 57220798 (-)
G61978 NA other downstream 518123 56524970 ~ 56533975 (-)
G61715 NA other downstream 898180 56153430 ~ 56153918 (-)
G61563 NA other downstream 1218738 55832825 ~ 55833928 (-)
G60624 NA other downstream 1848356 55203417 ~ 55203742 (-)
G60614 NA other downstream 1858375 55193297 ~ 55193723 (-)
G63328 NA other upstream 334346 57397194 ~ 57398488 (-)
G65147 NA other upstream 1721894 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 2081525 59144373 ~ 59199471 (-)
LOC110526097 LOC106576849 other upstream 3367359 60430184 ~ 60495300 (-)
G68736 NA other upstream 4619430 61682278 ~ 61686308 (-)

Expression


Co-expression Network