G62625


Basic Information

Item Value
gene id G62625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 57241548 ~ 57241899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU69513
TTCAaatctaaatgtaaaaaaaataatgcatttgtacataaaatacatttattcAAATTGGTAGCAACATTAACAACAAATGAACAACATTAATTGACAATAGAAGTAACAACCGTTAATTAACACATATGTAACCAAATAAGAGCATCCTTACAACACTAATTTAAAAACTATATTGTGTGCCTCTGTGTGGGATGTgggtgagagacaaagagagatggaAGTGGAGTTAAAATTAGGATTGGGTACAATCCTAGATCCATGATCAGTGGCAACTCTATTCGAGGCAAGGGGATTTAAAGGTggtgaaacacacaacatgacagttTGGGTAGGAGAGCATCCAAGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69513 True 352 lncRNA 0.45 1 57241548 57241899

Neighbor

gene id symbol gene type direction distance location
vsir cssa18h10orf54 coding upstream 178697 57035608 ~ 57062851 (+)
eif3s6ip LOC106576896 coding upstream 337322 56894252 ~ 56904226 (+)
LOC110525521 LOC106576899 coding upstream 644895 56551748 ~ 56596653 (+)
LOC118964919 NA coding upstream 1216635 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 1411362 55815371 ~ 55830186 (+)
LOC110525562 LOC106576893 coding downstream 380368 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 452599 57694498 ~ 57722025 (+)
wdr11 wdr11 coding downstream 564235 57806134 ~ 57940604 (+)
LOC110525578 NA coding downstream 719817 57961716 ~ 57963823 (+)
fam160b1 fam160b1 coding downstream 1566471 58808370 ~ 58838199 (+)
G62614 NA non-coding upstream 16764 57224149 ~ 57224784 (+)
G62612 NA non-coding upstream 24284 57216765 ~ 57217264 (+)
G62610 NA non-coding upstream 29316 57212017 ~ 57212232 (+)
G62608 NA non-coding upstream 36487 57204466 ~ 57205061 (+)
G62606 NA non-coding upstream 40781 57200548 ~ 57200767 (+)
G62628 NA non-coding downstream 2417 57244316 ~ 57244564 (+)
G62632 NA non-coding downstream 7688 57249587 ~ 57249798 (+)
G62635 NA non-coding downstream 12678 57254577 ~ 57254857 (+)
G62641 NA non-coding downstream 19899 57261798 ~ 57262000 (+)
G62645 NA non-coding downstream 25713 57267612 ~ 57267930 (+)
G61806 NA other upstream 989533 56249888 ~ 56252015 (+)
G61804 NA other upstream 993778 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 1211177 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 1318172 55905508 ~ 55923376 (+)
G59963 NA other upstream 2520085 54721188 ~ 54721463 (+)
G63958 NA other downstream 924666 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 979623 58221522 ~ 58223130 (+)
G64292 NA other downstream 1344959 58586858 ~ 58587585 (+)
G64315 NA other downstream 1423435 58665334 ~ 58665906 (+)
G64338 NA other downstream 1457397 58699296 ~ 58700379 (+)

Expression


Co-expression Network