Gene
RNA
| Item | Value |
|---|---|
| gene id | G62628 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 57244316 ~ 57244564 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: cadherin-23-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69516 | True | 249 | lncRNA | 0.43 | 1 | 57244316 | 57244564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vsir | cssa18h10orf54 | coding | upstream | 181465 | 57035608 ~ 57062851 (+) |
| eif3s6ip | LOC106576896 | coding | upstream | 340090 | 56894252 ~ 56904226 (+) |
| LOC110525521 | LOC106576899 | coding | upstream | 647663 | 56551748 ~ 56596653 (+) |
| LOC118964919 | NA | coding | upstream | 1219403 | 55976159 ~ 56024913 (+) |
| LOC110525514 | LOC106573043 | coding | upstream | 1414130 | 55815371 ~ 55830186 (+) |
| LOC110525562 | LOC106576893 | coding | downstream | 377703 | 57622267 ~ 57765398 (+) |
| LOC118964920 | NA | coding | downstream | 449934 | 57694498 ~ 57722025 (+) |
| wdr11 | wdr11 | coding | downstream | 561570 | 57806134 ~ 57940604 (+) |
| LOC110525578 | NA | coding | downstream | 717152 | 57961716 ~ 57963823 (+) |
| fam160b1 | fam160b1 | coding | downstream | 1563806 | 58808370 ~ 58838199 (+) |
| G62625 | NA | non-coding | upstream | 2417 | 57241548 ~ 57241899 (+) |
| G62614 | NA | non-coding | upstream | 19532 | 57224149 ~ 57224784 (+) |
| G62612 | NA | non-coding | upstream | 27052 | 57216765 ~ 57217264 (+) |
| G62610 | NA | non-coding | upstream | 32084 | 57212017 ~ 57212232 (+) |
| G62608 | NA | non-coding | upstream | 39255 | 57204466 ~ 57205061 (+) |
| G62632 | NA | non-coding | downstream | 5023 | 57249587 ~ 57249798 (+) |
| G62635 | NA | non-coding | downstream | 10013 | 57254577 ~ 57254857 (+) |
| G62641 | NA | non-coding | downstream | 17234 | 57261798 ~ 57262000 (+) |
| G62645 | NA | non-coding | downstream | 23048 | 57267612 ~ 57267930 (+) |
| G62655 | NA | non-coding | downstream | 39216 | 57283780 ~ 57284083 (+) |
| G61806 | NA | other | upstream | 992301 | 56249888 ~ 56252015 (+) |
| G61804 | NA | other | upstream | 996546 | 56246584 ~ 56247770 (+) |
| G61284 | LOC106573044 | other | upstream | 1213945 | 56019476 ~ 56030371 (+) |
| G61202 | LOC106573044 | other | upstream | 1320940 | 55905508 ~ 55923376 (+) |
| G59963 | NA | other | upstream | 2522853 | 54721188 ~ 54721463 (+) |
| G63958 | NA | other | downstream | 922001 | 58166565 ~ 58168178 (+) |
| G63959 | fgfr2 | other | downstream | 976958 | 58221522 ~ 58223130 (+) |
| G64292 | NA | other | downstream | 1342294 | 58586858 ~ 58587585 (+) |
| G64315 | NA | other | downstream | 1420770 | 58665334 ~ 58665906 (+) |
| G64338 | NA | other | downstream | 1454732 | 58699296 ~ 58700379 (+) |
