G62641


Basic Information

Item Value
gene id G62641
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 57261798 ~ 57262000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU69529
GTATAATCttttaaattatatcataaatcgGACTGATGgtgttatgtcacacatgcagctaacaaaaatatatggaaatgtctgctctgtCTAAAATTACAAccaaaaatggaagaggaaaaaggaagggggagaaagtgaGGAACTTGTCTGTCACCCCTGCATTAAAGACTAAAATTGGCTAAAGAAAATTGTAATAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69529 True 203 lncRNA 0.34 1 57261798 57262000

Neighbor

gene id symbol gene type direction distance location
vsir cssa18h10orf54 coding upstream 198947 57035608 ~ 57062851 (+)
eif3s6ip LOC106576896 coding upstream 357572 56894252 ~ 56904226 (+)
LOC110525521 LOC106576899 coding upstream 665145 56551748 ~ 56596653 (+)
LOC118964919 NA coding upstream 1236885 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 1431612 55815371 ~ 55830186 (+)
LOC110525562 LOC106576893 coding downstream 360267 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 432498 57694498 ~ 57722025 (+)
wdr11 wdr11 coding downstream 544134 57806134 ~ 57940604 (+)
LOC110525578 NA coding downstream 699716 57961716 ~ 57963823 (+)
fam160b1 fam160b1 coding downstream 1546370 58808370 ~ 58838199 (+)
G62635 NA non-coding upstream 6941 57254577 ~ 57254857 (+)
G62632 NA non-coding upstream 12000 57249587 ~ 57249798 (+)
G62628 NA non-coding upstream 17234 57244316 ~ 57244564 (+)
G62625 NA non-coding upstream 19899 57241548 ~ 57241899 (+)
G62614 NA non-coding upstream 37014 57224149 ~ 57224784 (+)
G62645 NA non-coding downstream 5612 57267612 ~ 57267930 (+)
G62655 NA non-coding downstream 21780 57283780 ~ 57284083 (+)
G62732 NA non-coding downstream 124020 57386020 ~ 57386235 (+)
G62735 NA non-coding downstream 130050 57392050 ~ 57392290 (+)
G62743 NA non-coding downstream 143364 57405364 ~ 57405597 (+)
G61806 NA other upstream 1009783 56249888 ~ 56252015 (+)
G61804 NA other upstream 1014028 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 1231427 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 1338422 55905508 ~ 55923376 (+)
G59963 NA other upstream 2540335 54721188 ~ 54721463 (+)
G63958 NA other downstream 904565 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 959522 58221522 ~ 58223130 (+)
G64292 NA other downstream 1324858 58586858 ~ 58587585 (+)
G64315 NA other downstream 1403334 58665334 ~ 58665906 (+)
G64338 NA other downstream 1437296 58699296 ~ 58700379 (+)

Expression


Co-expression Network