G64081


Basic Information

Item Value
gene id G64081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58303380 ~ 58304034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71023
ctttcaaagttcctgatgttccggattgactgaccttcatgtcttaaagtaatgatggactgtcgtttctctttgcttatttgagctgttcttgccataatctggacttggtcttttaaaaggtagggctatcttctgtataccacccctaccttgtcacaacaacactgattggctcaaacgcattaaggaaagaaattccacaaatgtacttttaacaaggcacacctgttaaatgaaatgcattccaggtgactacctcatgaagctggttgagagaatgccaagagcatgcaaagctgtcatcaaggcaaagggtggccactttgaagaatctcaaatataaaatatattttgatttgtttaacacgttttggGTTACgacatgatttcatgtgtgttatttcatagttgatgtcttcacttttattctacaatgcagaaaataggacaaacaaagaaaaccccttgaatgagtaggtttgtccacaattttgactggtactgtatgtctaagTGAACATCTataaaggtgtgtgtttgtacttcTGTGTGTGATAACCGCGACTGGGGCTGGTCGTTGAGACAAAGCATATGTTTTCTTAGGAGACCATGAGGTGAGCGGGGGTTAAATATTTTGACCATGGACTGCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71023 True 655 lncRNA 0.37 1 58303380 58304034

Neighbor

gene id symbol gene type direction distance location
LOC110525578 NA coding upstream 339557 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 365392 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 537982 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 581355 57694498 ~ 57722025 (+)
vsir cssa18h10orf54 coding upstream 1240529 57035608 ~ 57062851 (+)
fam160b1 fam160b1 coding downstream 504336 58808370 ~ 58838199 (+)
trnaa-ugc NA coding downstream 757773 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 905972 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 980290 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 1036505 59340539 ~ 59342276 (+)
G64002 NA non-coding upstream 136920 58166233 ~ 58166460 (+)
G64001 NA non-coding upstream 137904 58165138 ~ 58165476 (+)
G63950 NA non-coding upstream 190322 58112205 ~ 58113058 (+)
G63603 NA non-coding upstream 406549 57819187 ~ 57896831 (+)
G64083 NA non-coding downstream 872 58304906 ~ 58305109 (+)
G64090 NA non-coding downstream 13095 58317129 ~ 58317387 (+)
G64099 NA non-coding downstream 24829 58328863 ~ 58329066 (+)
G64100 NA non-coding downstream 25254 58329288 ~ 58329625 (+)
G64103 NA non-coding downstream 27805 58331839 ~ 58332043 (+)
G63959 fgfr2 other upstream 80250 58221522 ~ 58223130 (+)
G63958 NA other upstream 135202 58166565 ~ 58168178 (+)
G61806 NA other upstream 2051365 56249888 ~ 56252015 (+)
G61804 NA other upstream 2055610 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 2273009 56019476 ~ 56030371 (+)
G64292 NA other downstream 282824 58586858 ~ 58587585 (+)
G64315 NA other downstream 361300 58665334 ~ 58665906 (+)
G64338 NA other downstream 395262 58699296 ~ 58700379 (+)
G65442 NA other downstream 1020602 59324636 ~ 59325129 (+)
G66188 NA other downstream 1637452 59941486 ~ 59942064 (+)

Expression


Co-expression Network