G64880



Basic Information


Item Value
gene id G64880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58325502 ~ 58325709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU71857
gttaagaacaaattcttattttacaatgacggcctaccccagccaaaccctcccctaacctggacgaagctgggccaattgtgcgccaccctatcggactcccaatcacggccgattgtgatacagcctggtatcGAACGAGGGTCTgttgtgacgcctctagcactgagatgcagtgccttagaccgctgcgccactcgggagccac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU71857 True 208 lncRNA 0.55 1 58325502 58325709

Neighbor


gene id symbol gene type direction distance location
LOC110525582 fgfr2 coding downstream 42697 58166565 ~ 58282805 (-)
cdh23 cdh23 coding downstream 765078 56904609 ~ 57560442 (-)
smoc2 smoc2 coding downstream 1452118 56791621 ~ 56873384 (-)
LOC110521481 LOC106573508 coding downstream 1781204 56535669 ~ 56544298 (-)
LOC110525232 NA coding downstream 2245719 56069205 ~ 56079783 (-)
LOC110532479 ate1 coding upstream 27936 58353645 ~ 58535096 (-)
LOC110525605 LOC106576888 coding upstream 239521 58565230 ~ 58569247 (-)
habp2 habp2 coding upstream 265398 58591107 ~ 58599375 (-)
LOC110525652 LOC106576887 coding upstream 273451 58599160 ~ 58613936 (-)
ablim1a LOC106576884 coding upstream 288445 58614154 ~ 58760541 (-)
G64870 NA non-coding downstream 12590 58312398 ~ 58312912 (-)
G64862 NA non-coding downstream 20748 58304552 ~ 58304754 (-)
G64813 NA non-coding downstream 159805 58165491 ~ 58165697 (-)
G64810 NA non-coding downstream 161780 58163165 ~ 58163722 (-)
G64884 NA non-coding upstream 2477 58328186 ~ 58328386 (-)
G64886 NA non-coding upstream 4026 58329735 ~ 58329956 (-)
G64891 NA non-coding upstream 11018 58336727 ~ 58337080 (-)
G64748 NA non-coding upstream 21584 58347293 ~ 58351744 (-)
G64938 NA non-coding upstream 103441 58429150 ~ 58429450 (-)
G63328 NA other downstream 927014 57397194 ~ 57398488 (-)
G63093 NA other downstream 1262654 57035667 ~ 57062848 (-)
G61978 NA other downstream 1791527 56524970 ~ 56533975 (-)
G61715 NA other downstream 2171584 56153430 ~ 56153918 (-)
G61563 NA other downstream 2492142 55832825 ~ 55833928 (-)
G65147 NA other upstream 459033 58784742 ~ 58785617 (-)
LOC110525695 LOC106576879 other upstream 818664 59144373 ~ 59199471 (-)
LOC110526097 LOC106576849 other upstream 2104498 60430184 ~ 60495300 (-)
G68736 NA other upstream 3356569 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 3656022 61981652 ~ 61983330 (-)

Expression



Co-expression Network