G64345


Basic Information

Item Value
gene id G64345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58711732 ~ 58711948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71291
AACCTCCAGATGTATTTTGTTCAAATGGTGACACACACAACCAACAATTCCTGTCTACAATTCCAGTGGTGCATAACATAATTTGGGTGTACACCGTAATCTGTTTTTCAATTTCATATAGGTTGAATGCAAGATGAAGGCCTCATTCTAGCTTAGATTCCAAGCACGGGCCTCCAAAATGTTGTGACGTGAATATCATTAATGTGATGCCGATTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71291 True 217 lncRNA 0.39 1 58711732 58711948

Neighbor

gene id symbol gene type direction distance location
LOC110525578 NA coding upstream 747909 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 773744 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 946334 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 989707 57694498 ~ 57722025 (+)
vsir cssa18h10orf54 coding upstream 1648881 57035608 ~ 57062851 (+)
fam160b1 fam160b1 coding downstream 96422 58808370 ~ 58838199 (+)
trnaa-ugc NA coding downstream 349859 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 498058 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 572376 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 628591 59340539 ~ 59342276 (+)
G64342 NA non-coding upstream 7344 58704178 ~ 58704388 (+)
G64341 NA non-coding upstream 9334 58702155 ~ 58702398 (+)
G64339 NA non-coding upstream 10927 58700456 ~ 58700805 (+)
G64336 NA non-coding upstream 14632 58696700 ~ 58697100 (+)
G64325 NA non-coding upstream 28776 58682743 ~ 58682956 (+)
G64346 NA non-coding downstream 1299 58713247 ~ 58713516 (+)
G64347 NA non-coding downstream 2381 58714329 ~ 58771034 (+)
G64394 NA non-coding downstream 128190 58840138 ~ 58840812 (+)
G64397 NA non-coding downstream 129211 58841159 ~ 58843049 (+)
G64440 NA non-coding downstream 146880 58858828 ~ 58862006 (+)
G64338 NA other upstream 11353 58699296 ~ 58700379 (+)
G64315 NA other upstream 45826 58665334 ~ 58665906 (+)
G64292 NA other upstream 124147 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 488602 58221522 ~ 58223130 (+)
G63958 NA other upstream 543554 58166565 ~ 58168178 (+)
G65442 NA other downstream 612688 59324636 ~ 59325129 (+)
G66188 NA other downstream 1229538 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2602926 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 3017817 61729765 ~ 61733388 (+)
G70011 NA other downstream 4563015 63274963 ~ 63275296 (+)

Expression


Co-expression Network