G64397


Basic Information

Item Value
gene id G64397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58841159 ~ 58843049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71352
CTTTTAAATGTCATTGTTTAGGAGTGCaagggcgaattgagttattgcacacgtgcACTTGACAGAGTAGGCGTTGCCCAACGGAAATATACAAATACATGCCAGAACGAGgcaataggatctcactagctcatgcttggctctgcccacctccttgcttgttctgcccactatgattaatttgctcccattggaaacgacaggctgtggtctatttTGGGTTAATTATAAAAAATCTTTGGTTCCACTTTGCATGCCTTAATTTGCACTGTTGAGTAGCCTATTGCCAGACAATACACCTGCCTAacatggttggggtcaattccatttcaattctaggtaattcaggaagtaaaccaaattcaaattcaaaatgctcctaattgaaaagcattgaagagaatttTAATTtgtgtgtacttcctgaattgaccccaaccctgctgccTAAGCACACAATTATTGACATTAAATTGATTAACTAAAATCCTCTATTTTTGATAAGAAAGCTCTTTCTAAAAGCATCACTTTGCATGAGTTTGGTCATTTGTGTTGTTATAGTGTACGGTAGCTATTGTACTCCAACTAAGGCTCTGTGAAACACAATGGATTATATTCTGTTCCTAAACTTTAGTCATTCACTCACATTCACCTCTATAAAAAAGCCAATCTATTGAAATCTCAATCCTGCGTGACTTTGAATGACTTCCtcaatacaaataaaaaagtCTTCCAAAGAACATATGGCTTTCAATAATGTTCCGTGCAGTGTtgtccaaacatgattttaatttttatttaacggTTGTCAAGTCGCGGCGCAGTTGGCCCAGTGTTGGCCAagttcttattttacaatgacagtctaccccaggccaaaccctcccctccaCAGTGATAAACAGTGCTCTGTCCGGATGCATTAGTGCATGTCAGTGGCATGCTGGTTGCAGAGAGAATATGAGAGTTTCACTTGTAAAATGTAGGTCTTGCCGTACTGGGTGTAGCTGCACTGCAGAAACAGGGATCTGCATGGTGCCCGAGGGTGCCGTAAGGAATACCTGAGGGACAGCACCTAgccagagagagacggacacaTACAAACATGAACACAGCCCTCTTATCTAAACTAACATTTTACCACTGAATATATACAGAGACTAACATTGTACCACTGAATATATACAGAGACTATGTGCATGCTGTATAGGCTATACCACCTCACTTTGGGTCGGGGTCAAACACACTAGCCTGTCAGTCAACCTCCCGACTATATAGCTATATTCATACCAGATCTGGGTTAAAACAGTATGCGTTTTCATCCTTTGAGCATTTGATTAAGCCTGCCTGGAATGCCAGATAGGATAGGTTGCACCTTTTGGAGCATTTCATAGGTTAAACTCAACACAcccagctaaaaaaaaaaaatgaaagaaaaaaataCTAATTGAACTGAGGTCTGAATCATATATCAATCAACCTCCCCCATCAACCCACAGCCAGTGTAGCCTCACCTGTGTCCCAGCGTAGCCTACTGTAGTCAAGCGTGGTCTCACCTGTGTCCTGGCCCTGTCCGTGGGACACCTGCATGGCCGAGGGGCTGGACGCGTACATCACTGtgtgggggctggtgtacatcatGTGCCCCGCCATGGACGTGGGCACAGACGATGTGACAATGGTC

Function

NR:

description
serum response factor-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71352 True 1684 lncRNA 0.43 2 58841159 58843049
Loading

Neighbor

gene id symbol gene type direction distance location
fam160b1 fam160b1 coding upstream 2960 58808370 ~ 58838199 (+)
LOC110525578 NA coding upstream 877336 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 903171 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 1075761 57622267 ~ 57765398 (+)
trnaa-ugc NA coding downstream 218758 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 366957 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 441275 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 497490 59340539 ~ 59342276 (+)
cxcf1a cxcf1a coding downstream 640432 59483481 ~ 59485882 (+)
G64394 NA non-coding upstream 347 58840138 ~ 58840812 (+)
G64347 NA non-coding upstream 70125 58714329 ~ 58771034 (+)
G64346 NA non-coding upstream 127643 58713247 ~ 58713516 (+)
G64345 NA non-coding upstream 129211 58711732 ~ 58711948 (+)
G64342 NA non-coding upstream 136771 58704178 ~ 58704388 (+)
G64440 NA non-coding downstream 15779 58858828 ~ 58862006 (+)
G64577 NA non-coding downstream 204495 59047544 ~ 59048259 (+)
G64645 LOC100196663 non-coding downstream 369392 59212441 ~ 59234565 (+)
G64716 NA non-coding downstream 429162 59272211 ~ 59272491 (+)
G64718 NA non-coding downstream 432196 59275245 ~ 59280313 (+)
G64338 NA other upstream 140780 58699296 ~ 58700379 (+)
G64315 NA other upstream 175253 58665334 ~ 58665906 (+)
G64292 NA other upstream 253574 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 618029 58221522 ~ 58223130 (+)
G63958 NA other upstream 672981 58166565 ~ 58168178 (+)
G65442 NA other downstream 481587 59324636 ~ 59325129 (+)
G66188 NA other downstream 1098437 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2471825 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 2886716 61729765 ~ 61733388 (+)
G70011 NA other downstream 4431914 63274963 ~ 63275296 (+)

Expression

G64397 Expression in all Baseline Samples

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G64397 Expression in each Bioproject

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G64397 Expression in each Sample
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Co-expression Network