G64645 (LOC100196663)


Basic Information

Item Value
gene id G64645
gene name LOC100196663
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59212441 ~ 59234565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71611
ATTTTGTTTTAGACCAACTGAAATGTGTTTATTAGCCAATATCTACAGGCTACACCTGCATCACTTTAAAATGCATTATTTAAATATGAATCATTTgtaaaacagccataaaaatcACTAATGACTCAAGAGGCTTTGACACGTTTACAAAGTGTACAGAGAACTTTACACTTTTACTGTGCGCTTTAAGGTTAAGGAATCTGTTTGGTTTTACAGCAACACTACCCTGCAACAACACTTCTCCGCTTCAATAAGCCTCCAGTCACAATAAAACATCAATCAATGAAAACAATGATCAAATCTAAACCACAATGACACCGCCTATCTAATGCAAACTAATTCTATGCGCAGTGTTCACCCATCCGTAACTAACCCATTAACCATGTCCCTAACCTGTTACCTAATCCTGACTCACTAACTTGGCTTTAGCTCGGTCTCCAAGGAGAAGACTGGACAGCAGTCGGATTCCAGCAGCATCCTGCAGTGTGTGTAAACATGACAGTTTATTGAGAGGCTGATAGTTAACTGTGAATCGGCAGTATTACGTTGGTACCTAAGGTCTAACTGTGTTTACAGAGGGCAGTAGACTTCAGCAGTCCTTAGGGAGGGCAGTTGAACATCAGTATAAACAGATACTGCTGTATCAGGCAGTGTGGCCCGAGAGCATCCCCTAGCGTAGGACAAGAAGAATAGGCACATAAGTCTGGTTGCAGAAAGACAAAGGAAGAAGGGATGAAAGCAATGACAGATATATGGATGGATTGGATGAAGGCATGGATGGATGgttgaaagaaaaaaaaggacAGGGGGGGACCTGGTTTCATTCAGTTGGAAGGTAAGGGTGgatgggttaggggtaggggtaagAGGTCAGCAATTAAGGTTACAGGTCATCAGTGGAAGTCTGGTTTTTCGGGGAAGGTGCATCCTGCTCGTCTGATGATGACGTTGGCAGCGTAGTGTCCTGCTTTCACACACTGTTCCAACTCCTTGTCCTGGACCAACTCTGACAGGAATCCTCCTACAAAGGCATCTCCGGCTCCATTTGTGTCCACAATGTCCTTCTGGTCAATCTTCAGCACTGGGAACGTCTCCACCTTGTCacctccttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaataagggTTGAAAATGGCaaagcaaaacacacacacacacggtatatGGGTTGAAAATGGCAAATTTGGGCACTAATAGGCACCTTAATTGGaatgcagtggctg
>TU71612
ATTTTGTTTTAGACCAACTGAAATGTGTTTATTAGCCAATATCTACAGGCTACACCTGCATCACTTTAAAATGCATTATTTAAATATGAATCATTTgtaaaacagccataaaaatcACTAATGACTCAAGAGGCTTTGACACGTTTACAAAGTGTACAGAGAACTTTACACTTTTACTGTGCGCTTTAAGGTTAAGGAATCTGTTTGGTTTTACAGCAACACTACCCTGCAACAACACTTCTCCGCTTCAATAAGCCTCCAGTCACAATAAAACATCAATCAATGAAAACAATGATCAAATCTAAACCACAATGACACCGCCTATCTAATGCAAACTAATTCTATGCGCAGTGTTCACCCATCCGTAACTAACCCATTAACCATGTCCCTAACCTGTTACCTAATCCTGACTCACTAACTTGGCTTTAGCTCGGTCTCCAAGGAGAAGACTGGACAGCAGTCGGATTCCAGCAGCATCCTGCAGTGTGTGTAAACATGACAGTTTATTGAGAGGCTGATAGTTAACTGTGAATCGGCAGTATTACGTTGGTACCTAAGGTCTAACTGTGTTTACAGAGGGCAGTAGACTTCAGCAGTCCTTAGGGAGGGCAGTTGAACATCAGTATAAACAGATACTGCTGTATCAGGCAGTGTGGCCCGAGAGCATCCCCTAGCGTAGGACAAGAAGAATAGGCACATAAGTCTGGTTGCAGAAAGACAAAGGAAGAAGGGATGAAAGCAATGACAGATATATGGATGGATTGGATGAAGGCATGGATGGATGgttgaaagaaaaaaaaggacAGGGGGGGACCTGGTTTCATTCAGTTGGAAGGTAAGGGTGgatgggttaggggtaggggtaagAGGTCAGCAATTAAGGTTACAGGTCATCAGTGGAAGTCTGGTTTTTCGGGGAAGGTGCATCCTGCTCGTCTGATGATGACGTTGGCAGCGTAGTGTCCTGCTTTCACACACTGTTCCAACTCCTTGTCCTGGACCAACTCTGACAGGAATCTCCTACAAAGGCATCTCCGGCTCCATTTGTGTCCACAATGTCCTTCTGGTCAATCTTCAGCACTGGGAACGTCTCCACCTTGTCacctcctTTGGTCATGATGGTTCCGTCCTTCCCCTGAGTAAAGACAACGATTCTCGGTCTCTTCTTGTTGACTTTGGGCAGAGCCTCGGCCTTCTTAGCAATCTCCTCGATGTCCTCAGTCTGAAAGCCTTGCTCTTTTGAAAACGTGGCCGCCTccgtctCGTTGCCGAACAGCACGTCCACATAGGGCATGACCTCCATGAGGGCATCTTTGAAGAACTGAGAGATGAAGGGAGCGGAGAGATTCAGAGTGAACAGCTTGTTGTTCTCAGAAGCGTGTTTGGCCACTTTCAGTATGGACTCCAGAGACACCGTCAGGAAGAAACCAGCGATATAGTAAACTTTGGCTTTTTCCACCAGTTTCCAGTTCTCCTTCAAGTCCAGATGTTTGTCCTTCTTATAACAGTTAGCTGCCGCTAGGTTAGCTACCAGGGAcCTGTTGTCTCCGGTGATGCATGCGGCACAGGTCCCTGTAGGCTCCTCTGTCTGCTCATAGTAGTAGGCGTCCACGTGGGCCTCGTCTGCCTTCTGCTTCAGAATCTCCCCAAACTTATCCTCTCCGATACAGCCGAAGAACGTACACACCTTGTGGGGATCCTGGATCatccaCTGGGCGATTTTTATAGAGTTCTGTGTAGCTCCTCCGGCATGGTACTCTACTTTAAACTTTTTGACAATCTCTTCAAACAATGCTTTATGCTTGTCCTCGGCCAGGATCTGGTCGTTGGGCTTCAGACCGtacTTCTCCAGGAAGTCCTTGTCCACGACGGCTGAGATGTCCAGCAGGGGGTTCCCCATCCCGAACAGAGAATTAGGgCGTGCTGCTGGCATGGTGTGCGTCTTTTTGTCTCAGTAACAGTTTCACTCTGTGTAACAGACCTGTTGGCCGCCTCAGACAAACCA

Function

NR:

description
adenosine kinase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71611 False 1280 lncRNA 0.44 2 59212441 59213818
TU71612 True 2005 lncRNA 0.40 11 59212441 59234565

Neighbor

gene id symbol gene type direction distance location
LOC110525756 NA coding upstream 266 59210006 ~ 59212175 (+)
trnaa-ugc NA coding upstream 150561 59061807 ~ 59061880 (+)
fam160b1 fam160b1 coding upstream 374242 58808370 ~ 58838199 (+)
LOC110525578 NA coding upstream 1248618 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 1274453 57806134 ~ 57940604 (+)
erlin1 LOC106576878 coding downstream 49759 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 105974 59340539 ~ 59342276 (+)
cxcf1a cxcf1a coding downstream 248916 59483481 ~ 59485882 (+)
cxcl12a cxcl12a coding downstream 355099 59589595 ~ 59631391 (+)
LOC110525860 NA coding downstream 365340 59599905 ~ 59608419 (+)
G64577 NA non-coding upstream 164182 59047544 ~ 59048259 (+)
G64440 NA non-coding upstream 350435 58858828 ~ 58862006 (+)
G64397 NA non-coding upstream 369392 58841159 ~ 58843049 (+)
G64394 NA non-coding upstream 371629 58840138 ~ 58840812 (+)
G64347 NA non-coding upstream 441407 58714329 ~ 58771034 (+)
G64716 NA non-coding downstream 37646 59272211 ~ 59272491 (+)
G64718 NA non-coding downstream 40680 59275245 ~ 59280313 (+)
G65432 NA non-coding downstream 70201 59304766 ~ 59304983 (+)
G65441 NA non-coding downstream 86239 59320804 ~ 59321015 (+)
G65446 NA non-coding downstream 93091 59327656 ~ 59327869 (+)
G64338 NA other upstream 512062 58699296 ~ 58700379 (+)
G64315 NA other upstream 546535 58665334 ~ 58665906 (+)
G64292 NA other upstream 624856 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 989311 58221522 ~ 58223130 (+)
G63958 NA other upstream 1044263 58166565 ~ 58168178 (+)
G65442 NA other downstream 90071 59324636 ~ 59325129 (+)
G66188 NA other downstream 706921 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2080309 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 2495200 61729765 ~ 61733388 (+)
G70011 NA other downstream 4040398 63274963 ~ 63275296 (+)

Expression


Co-expression Network