Gene
RNA
| Item | Value |
|---|---|
| gene id | G65397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 59227958 ~ 59228740 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: activating transcription factor 7-interacting protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU72440 | True | 649 | lncRNA | 0.43 | 2 | 59227958 | 59228740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525695 | LOC106576879 | coding | downstream | 28487 | 59144373 ~ 59199471 (-) |
| LOC110525690 | LOC106576880 | coding | downstream | 93629 | 58924580 ~ 59134329 (-) |
| LOC110525667 | LOC106576882 | coding | downstream | 313611 | 58838261 ~ 58914347 (-) |
| ablim1a | LOC106576884 | coding | downstream | 467417 | 58614154 ~ 58760541 (-) |
| LOC110525652 | LOC106576887 | coding | downstream | 614022 | 58599160 ~ 58613936 (-) |
| spef1 | spef1 | coding | upstream | 81566 | 59310306 ~ 59318124 (-) |
| fuom | fuom | coding | upstream | 113582 | 59342322 ~ 59348237 (-) |
| echs1 | echs1 | coding | upstream | 120816 | 59349556 ~ 59368121 (-) |
| mtg1 | mtg1 | coding | upstream | 151072 | 59379812 ~ 59398680 (-) |
| si:dkey-275b16.2 | paox | coding | upstream | 177404 | 59406144 ~ 59422417 (-) |
| G65188 | NA | non-coding | downstream | 297371 | 58863756 ~ 58930587 (-) |
| G65140 | NA | non-coding | downstream | 456111 | 58771543 ~ 58771847 (-) |
| G65091 | NA | non-coding | downstream | 456921 | 58714310 ~ 58771037 (-) |
| G65081 | NA | non-coding | downstream | 524866 | 58702692 ~ 58703092 (-) |
| G65074 | NA | non-coding | downstream | 534493 | 58693249 ~ 58693465 (-) |
| G65419 | NA | non-coding | upstream | 53250 | 59281990 ~ 59282189 (-) |
| G65420 | NA | non-coding | upstream | 53584 | 59282324 ~ 59282597 (-) |
| G65433 | NA | non-coding | upstream | 76106 | 59304846 ~ 59305177 (-) |
| G65743 | NA | non-coding | upstream | 91309 | 59320049 ~ 59320271 (-) |
| G65147 | NA | other | downstream | 442341 | 58784742 ~ 58785617 (-) |
| G63328 | NA | other | downstream | 1829470 | 57397194 ~ 57398488 (-) |
| G63093 | NA | other | downstream | 2165110 | 57035667 ~ 57062848 (-) |
| G61978 | NA | other | downstream | 2693983 | 56524970 ~ 56533975 (-) |
| LOC110526097 | LOC106576849 | other | upstream | 1201467 | 60430184 ~ 60495300 (-) |
| G68736 | NA | other | upstream | 2453538 | 61682278 ~ 61686308 (-) |
| LOC110526417 | LOC106576819 | other | upstream | 2752991 | 61981652 ~ 61983330 (-) |
| G69210 | NA | other | upstream | 3182782 | 62411522 ~ 62418296 (-) |
| G70013 | NA | other | upstream | 4048468 | 63277208 ~ 63277752 (-) |
