G65982



Basic Information


Item Value
gene id G65982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59729847 ~ 59736154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU73084
CCGCTTCTTTGGTCTTTTTCCCTTCCTTGCCCACAGcagtcttcttcttctgctttaGGGGTGCAGGTCTCTTCCTGTCCACCGCCATCTTAGCTTGGTCCGCCAGGTACTGAACAATAAAACAATCAATCAACctatcaaccaatcaaccaatcaatgaaAAAAATGATCCACCTACAGCGTCGAAGCCAGAGTTTTCAGACAGCATGAACTTGCGTggttccttcttctcctccttctgagGGACCCTCGTTCCAAACGGTGTCATGTGACCCGTCCGGATTAGCTCCTCCCACTCCGTCTCCTGAGCCGGCATCAGCATACTGCCCAGAGTAGATGGGCCGGGCTCTTCGTCCACATCGTCCTCCAGCAGTAGCTCAGCCTCTATCTTCAGTGTGTCTTCTCC

Function


NR:

description
DNA excision repair protein ERCC-6

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU73084 True 406 lncRNA 0.52 2 59729847 59736154

Neighbor


gene id symbol gene type direction distance location
LOC110532486 LOC106595224 coding downstream 85562 59549868 ~ 59644285 (-)
tmem72 tmem72 coding downstream 213115 59511553 ~ 59516732 (-)
rassf4a rassf4 coding downstream 222779 59438585 ~ 59507068 (-)
si:dkey-275b16.2 paox coding downstream 307430 59406144 ~ 59422417 (-)
mtg1 mtg1 coding downstream 331167 59379812 ~ 59398680 (-)
LOC118964951 NA coding upstream 280842 60016544 ~ 60024584 (-)
LOC110525944 LOC106576863 coding upstream 291064 60027218 ~ 60064906 (-)
LOC110525964 LOC106576862 coding upstream 353836 60089990 ~ 60124142 (-)
LOC110525977 LOC106576859 coding upstream 394161 60130315 ~ 60172542 (-)
LOC110526047 LOC106576854 coding upstream 545518 60281672 ~ 60301313 (-)
G65937 NA non-coding downstream 44101 59663612 ~ 59685746 (-)
G65862 NA non-coding downstream 196757 59532878 ~ 59533090 (-)
G65857 NA non-coding downstream 203631 59525866 ~ 59526216 (-)
G65851 NA non-coding downstream 213946 59515547 ~ 59515901 (-)
G66080 NA non-coding upstream 125056 59861210 ~ 59861428 (-)
G66100 NA non-coding upstream 138415 59874569 ~ 59875057 (-)
G66108 NA non-coding upstream 145298 59881452 ~ 59882036 (-)
G66120 NA non-coding upstream 154254 59890408 ~ 59891088 (-)
G66146 NA non-coding upstream 171570 59907724 ~ 59908009 (-)
LOC110525695 LOC106576879 other downstream 574702 59144373 ~ 59199471 (-)
G65147 NA other downstream 944230 58784742 ~ 58785617 (-)
G63328 NA other downstream 2331359 57397194 ~ 57398488 (-)
G63093 NA other downstream 2666999 57035667 ~ 57062848 (-)
G61978 NA other downstream 3195872 56524970 ~ 56533975 (-)
LOC110526097 LOC106576849 other upstream 694053 60430184 ~ 60495300 (-)
G68736 NA other upstream 1946124 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 2245577 61981652 ~ 61983330 (-)
G69210 NA other upstream 2675368 62411522 ~ 62418296 (-)
G70013 NA other upstream 3541054 63277208 ~ 63277752 (-)

Expression



Co-expression Network