G66225


Basic Information

Item Value
gene id G66225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60027237 ~ 60091030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU73365
TGCAGGAGTTGCAGGTTGACATTGTCTAACTTTTTCCAGTGTGTACATTAAGTCTGTAGTGAGGCCTTGTCCAGATCAAAAGGCTAAAATTTATACAACTGGCCTTTGCGGAAAACACCACGAAACCTGGGTTGCGCTCAGGAGGGTGAAACTTACTAGACGGATTCCACAGATTCCACTGAACGTTCCAAAGTATTGAGCCCTCCTGAACGCAGCCATGTTTCTGGTGTGTGATAGGCCTGACCACAGCCAGGGATGGGGCCCAGTTCCAAACATACACAGGTCATATAGGGATTGAACGTTGAGAAGAGGGGTGAGGGATCGGTTTGGAATCGAGCCATCAAATACGTCTTCATCTAGAAAAAGGAAAACATAGCTGGCGGCAAACCTTTTGAAACCCCTGGAGAACATCCATCTAGCATACAAATCAACCACTCACTACCTACTCTATAGTCTACAAATCATAGGTATTGCACATACActgaaaataaaacaaaaataaatgtatatacaTAGTACACATGGGTCGAATCAACATTGTCTCCCACGTCATCCCACAtcatggaatagacattgaattgacgtctgtgcccagtgagtACGTACAATACTAGCAGTCTTCTAACATTGATAATTGTACATttccaaataaataaataaaaaataaaactttaTTCACGTGTTTTTTTAAGACCGTTTGCTGTGGACTGTTATGTCAGTCAGAAACTCATATAGGCGAGGTAGTTAATGAAAACCAAGTCCTCTAACAGAGacggcacagagagaggagctcaGGCGTACTAAGCTAACAAAACACTCTTCGAGTGCCTCAACAgcagagcgagatagagaggggCTAAAAAAAAACGCAGACAACTGTAAGAGCACTTAAATCAAATTGAATGAATTAGGGCTAGGGGTTTTGCCTGGTCATGTAACCTGAGGAAAGACTCCTGGCCCCAACAATAAAACATAAGCAGCCAATTTGTCCCAAATTGGTCCCTTACCGCTACCCTTGGCCCCAACCCTTTGATGTTTGCAGAACTGTTCAGGTGTTTCTACTTATCcagaactactactactgcaaacGTCGAAGGGTGAGGGACAAGCAGGAGGGACAGGGAGCAAATTGTAACTGGTTGAAGAAGTCAAGCAACAAAGAGGGGAAAGTGTCTAAAGTATTTGGGCCAGGTGATTTTATTGCCTTCCCATACTCCCATGTCTGCTCATTAACATTTGATAACAAAGCTATCTCCAGATCCAACACCCCAAAAAAACTTTACAATTACAGTCATATAATAAATAAAGAGATGTTCCATTACTAGAAAAAATAAAGGTGTAGCCATGACTCCAGAACACTACAGCTACGGGTAGGCAGAGTAACAGGGTGTCAAAATATTTTTTAGGATCCATTTAAATAGAGATGACCACTAAATACTAGAAAATAAAATATGTGTTTGTAAGGAAACACTTTCTAATAGAGAAAAGGGGGAAAAAGTTCCATCCACTGTGAGATCCAAAAGACTACAACTTACAGCATAGAAATACTGTACACAGCTTGGAGGGACAGAAGCTGAcacaagaaaataaataaataaatataataatttaCAGCATGTACACAATCGGCAATACAGAATATAGGAGACAGAGAAATTAAAAGAAGctgtacattaaaaaaaaatgtttttaacaaaGGACCCTTAAGTGTCTCAAACTATGTATACTATGACAGGATGTGTagggctgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtactgcagacATTGAGAATGTGGCCTTTAATTCCTGACACACAGCATGGAAACATGAGGTGCATGTGTGGCGCATATGCCGTctacagaaaacagttctgtccATCGAGTGAGTGCGAGATCGCTCCTGCGTTTCAGTCCATCACTGAGGGAGAGTAGCACTTCCTTATTGAAATACACCATGCGACTGGCTTTAGTCCTGTTCAGAATGTTCCATGTAGTAGTTTTAGGTAGGGGTGCCAGAGTCCTGGTAGTGACAATCATTTGATTTCAATGAAGgtttattttaatttgatttatttaacctttatttaactaggcaagtccgttaagaacaaagtTCTTATTTAGGCGACAGAGTTCTGTTTGAAATGTTCCATGATCCTCTTGTCAGGGAGTTGTGACAGTCATGGTTATAGTCCCTGAGAGCAGTAACAGTCCTGGCCAGTCCTCTTTCCCTCAGCTCAGTAGGGTTGGACTTGGGCTCGGGGGATGATGCTCATGGCTATGTGGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73365 True 2324 lncRNA 0.55 2 60027237 60091030

Neighbor

gene id symbol gene type direction distance location
LOC110525930 LOC106576864 coding upstream 8542 59999410 ~ 60018695 (+)
si:ch211-223a10.1 LOC106576865 coding upstream 33586 59969512 ~ 59993651 (+)
lrrc18a LOC106576925 coding upstream 100099 59922675 ~ 59927138 (+)
drgx LOC106576867 coding upstream 233474 59786129 ~ 59793763 (+)
ercc6 ercc6 coding upstream 248500 59725618 ~ 59778737 (+)
LOC110526033 LOC106576855 coding downstream 92185 60183215 ~ 60218672 (+)
LOC118966766 NA coding downstream 126091 60217121 ~ 60217262 (+)
LOC110526041 LOC106576856 coding downstream 138441 60229471 ~ 60264209 (+)
LOC110526060 zdhhc16 coding downstream 210463 60301493 ~ 60370189 (+)
LOC110526075 NA coding downstream 214739 60305769 ~ 60308241 (+)
G66214 NA non-coding upstream 6536 60020477 ~ 60020701 (+)
G66187 NA non-coding upstream 88425 59938558 ~ 59938812 (+)
G66145 NA non-coding upstream 119248 59907712 ~ 59907989 (+)
G66142 NA non-coding upstream 119536 59907120 ~ 59907701 (+)
G66269 LOC106576859 non-coding downstream 39289 60130319 ~ 60141209 (+)
G66308 NA non-coding downstream 84948 60175978 ~ 60176307 (+)
G66310 NA non-coding downstream 88866 60179896 ~ 60180249 (+)
G66370 NA non-coding downstream 220476 60311506 ~ 60312165 (+)
G66372 NA non-coding downstream 225275 60316305 ~ 60316536 (+)
G66188 NA other upstream 85173 59941486 ~ 59942064 (+)
G65442 NA other upstream 702108 59324636 ~ 59325129 (+)
G64338 NA other upstream 1326858 58699296 ~ 58700379 (+)
G64315 NA other upstream 1361331 58665334 ~ 58665906 (+)
G64292 NA other upstream 1439652 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 1223844 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1638735 61729765 ~ 61733388 (+)
G70011 NA other downstream 3183933 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 4718559 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 5824705 65915581 ~ 65922285 (+)

Expression


Co-expression Network