G67011


Basic Information

Item Value
gene id G67011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60369797 ~ 60371381 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU74231
CCGAGTGCATCGAGCATAGCACGTTAACCCTGTTACTCATTGGTAAACAAGTTCGAATATTTTGTTAAGCTTGCTTTCAATTGCCTCTCCCTTGATTCCAAGGGGAGTTATGGCTGATTTATGACATCGTTAACCATTACCGTCAACCCCTTTTCAGTGATTTTTCTCAATGTTAATGTCAAGATGGGAAATGACAATGTTAAAAATAGATTAAAGCCGAGATCcacatttgttattgttttaagGAAATGTAATATCGCAAACATATCGCTCATCAAGtacctcccttgtacttgatgaGTTAAGTTCattgattagtaaggaactccccacacgtggttgtctagggcttaattgaaaggaaaaaccatggaatgagtttgacatgcCTAAAGTACACCAGAGTCCTATTGTggacgtgtcataatacccataaaacctagcggtcaaaccgggaaatggttccaatcgtttttccaccattcatttttccccatAGGAGATTTTAGAAACACCTAAAATAacagctgtgttttgtgtagtcaCCCTgctgtgacgttttgataaccatgttaATCTCTGACAAGGTGACTTAAATCAAAATagtaattagcatcaaagtagacatcatgaaagactacaaatccctgcaagtcATCTCTAGCtaacacctttgctaacaggtattctGTCACTTGAAAACTTGCACAGTTGACAGAATTGTCCATCTAAAGAAATGGTGCCAATGTATTTATTACATTTAGCTGACATTAGATGGTAAGAATCTCGGGATTAACTTTTTCCTTGTTTCGGAAGTCTCATCctgatcatcatggcatttgtagttctttatgatagtcACAGTAGCACTTcgtatttttgggggggggggatgaatacaggcaaatatattgatgaGTCACTGCTTTTTTTTAATATCATCTAGgaagatttacacggttatcaaaactaAACCCAGCCCTTAATttaagtgttttgtttttttaaacctaTGGGAAAAGTGAATGGTGTAAAATAATTATTGGAataatttccctgtttgacctctaggtcttatgggtaatatgacgactcatactgtggtacacTGTAGTACAGTCTGAAAACATTATGAAACAGTTCATCCCCACATCATTACAAGTTCTGGAGTGTGGTTGGCCTTTATTACACAAGCCCTGTGCCAGGACCAGGGTTGAAACATTTTGTAGGGTTGTTTCACTTAGGAGCAGCAAACGTTCCCCATCTCTTCCCTGTTGTCCTCCCAGTATTCACTCTCCTGCTCGTCTCCAAAACCTGGTCATGTGACATCAGTATATGTAGGGTACAGGGGCCGCTGGGAGATGTAGTTCTGTGTGGACAGAGTCTGTGGGGTCAGTGATCAGACAGACATCAGGTGTTTCCTCATTTTGTAGAAGTCTCAATTCAGTTATTTTGTATTTGGCTCAGACGGGCATCATGTCTTTTCTGAATGGATAGATGTCCCAGGTCAGGCCGTTCCCAATGGGGACATGTCCAGAGGGCAGGATGACTCGCGTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74231 True 1558 lncRNA 0.40 2 60369797 60371381

Neighbor

gene id symbol gene type direction distance location
LOC110526081 NA coding downstream 20488 60342589 ~ 60349309 (-)
LOC110532500 NA coding downstream 33576 60334984 ~ 60336221 (-)
LOC110526047 LOC106576854 coding downstream 68484 60281672 ~ 60301313 (-)
LOC110525977 LOC106576859 coding downstream 197255 60130315 ~ 60172542 (-)
LOC110525964 LOC106576862 coding downstream 245655 60089990 ~ 60124142 (-)
LOC110526097 LOC106576849 coding upstream 58803 60430184 ~ 60495300 (-)
gdf10a LOC106576847 coding upstream 154038 60525419 ~ 60538921 (-)
LOC110519525 LOC106576846 coding upstream 289086 60660467 ~ 60695525 (-)
LOC110532522 LOC106576846 coding upstream 323754 60695135 ~ 60707046 (-)
LOC118964986 LOC106576846 coding upstream 344563 60715944 ~ 60717300 (-)
G66969 NA non-coding downstream 53557 60316038 ~ 60316240 (-)
G66966 NA non-coding downstream 56741 60312810 ~ 60313056 (-)
G66967 NA non-coding downstream 60894 60308645 ~ 60308903 (-)
G66922 NA non-coding downstream 105596 60261877 ~ 60264201 (-)
G66905 NA non-coding downstream 153264 60207483 ~ 60216533 (-)
G67056 rrp12 non-coding upstream 45913 60417294 ~ 60421548 (-)
G67094 NA non-coding upstream 125698 60497079 ~ 60497308 (-)
G67095 NA non-coding upstream 127112 60498493 ~ 60498701 (-)
G67096 LOC106576848 non-coding upstream 127730 60499111 ~ 60499334 (-)
G67099 NA non-coding upstream 134458 60505839 ~ 60506099 (-)
LOC110525695 LOC106576879 other downstream 1214652 59144373 ~ 59199471 (-)
G65147 NA other downstream 1584180 58784742 ~ 58785617 (-)
G63328 NA other downstream 2971309 57397194 ~ 57398488 (-)
G63093 NA other downstream 3306949 57035667 ~ 57062848 (-)
G61978 NA other downstream 3835822 56524970 ~ 56533975 (-)
G68736 NA other upstream 1310897 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 1610350 61981652 ~ 61983330 (-)
G69210 NA other upstream 2040141 62411522 ~ 62418296 (-)
G70013 NA other upstream 2905827 63277208 ~ 63277752 (-)

Expression


Co-expression Network