G66480


Basic Information

Item Value
gene id G66480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60511670 ~ 60512034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU73644
cttgccactcttccataaaggccatatttgtgcaatatacaactgattgttgtcctatggacagagtctcccccctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtattagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73644 True 365 lncRNA 0.44 1 60511670 60512034

Neighbor

gene id symbol gene type direction distance location
prdm8 LOC106576848 coding upstream 10052 60496970 ~ 60501618 (+)
rrp12 rrp12 coding upstream 83959 60403081 ~ 60427711 (+)
LOC110521558 LOC106576852 coding upstream 120044 60374052 ~ 60391626 (+)
LOC110526060 zdhhc16 coding upstream 141481 60301493 ~ 60370189 (+)
LOC110526122 LOC106576844 coding downstream 605216 61117250 ~ 61227125 (+)
LOC110526134 NA coding downstream 618072 61091580 ~ 61132005 (+)
lrrfip2 lrrfip2 coding downstream 830071 61342105 ~ 61401807 (+)
LOC110526206 fam83h coding downstream 925573 61437607 ~ 61488427 (+)
LOC110526212 LOC106576837 coding downstream 988980 61501014 ~ 61505305 (+)
G66475 NA non-coding upstream 5861 60505582 ~ 60505809 (+)
G66435 NA non-coding upstream 16575 60494733 ~ 60495095 (+)
G66375 NA non-coding upstream 190837 60320593 ~ 60320833 (+)
G66372 NA non-coding upstream 195134 60316305 ~ 60316536 (+)
G66370 NA non-coding upstream 199505 60311506 ~ 60312165 (+)
G66487 NA non-coding downstream 12205 60524239 ~ 60559757 (+)
G67445 NA non-coding downstream 496495 61008529 ~ 61008729 (+)
G67460 NA non-coding downstream 508819 61020853 ~ 61021079 (+)
G66188 NA other upstream 569606 59941486 ~ 59942064 (+)
G65442 NA other upstream 1186541 59324636 ~ 59325129 (+)
G64338 NA other upstream 1811291 58699296 ~ 58700379 (+)
G64315 NA other upstream 1845764 58665334 ~ 58665906 (+)
G64292 NA other upstream 1924085 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 802840 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1217731 61729765 ~ 61733388 (+)
G70011 NA other downstream 2762929 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 4297555 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 5403701 65915581 ~ 65922285 (+)

Expression


Co-expression Network