Gene
RNA
| Item | Value |
|---|---|
| gene id | G67567 |
| gene name | mrp2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 61247192 ~ 61263352 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mrp2 | A structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 38. Orthologous to human MRPS14 (mitochondrial ribosomal protein S14). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU74801 | True | 762 | lncRNA | 0.50 | 4 | 61247192 | 61263352 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526122 | LOC106576844 | coding | upstream | 20067 | 61117250 ~ 61227125 (+) |
| LOC110526134 | NA | coding | upstream | 115187 | 61091580 ~ 61132005 (+) |
| prdm8 | LOC106576848 | coding | upstream | 745574 | 60496970 ~ 60501618 (+) |
| rrp12 | rrp12 | coding | upstream | 819481 | 60403081 ~ 60427711 (+) |
| LOC110521558 | LOC106576852 | coding | upstream | 855566 | 60374052 ~ 60391626 (+) |
| lrrfip2 | lrrfip2 | coding | downstream | 78753 | 61342105 ~ 61401807 (+) |
| LOC110526206 | fam83h | coding | downstream | 174255 | 61437607 ~ 61488427 (+) |
| LOC110526212 | LOC106576837 | coding | downstream | 237662 | 61501014 ~ 61505305 (+) |
| herc4 | herc4 | coding | downstream | 254601 | 61517953 ~ 61540937 (+) |
| LOC110526236 | sirt1 | coding | downstream | 285829 | 61549181 ~ 61561338 (+) |
| G67595 | NA | non-coding | upstream | 1949 | 61243450 ~ 61245243 (+) |
| G67594 | NA | non-coding | upstream | 5315 | 61241562 ~ 61241877 (+) |
| G67593 | NA | non-coding | upstream | 6057 | 61240837 ~ 61241135 (+) |
| G67592 | NA | non-coding | upstream | 6584 | 61240232 ~ 61240608 (+) |
| G67566 | NA | non-coding | downstream | 8278 | 61271630 ~ 61281369 (+) |
| G67622 | mrp2 | non-coding | downstream | 36824 | 61300176 ~ 61302265 (+) |
| G67812 | NA | non-coding | downstream | 56241 | 61319593 ~ 61319867 (+) |
| G67821 | NA | non-coding | downstream | 57861 | 61321213 ~ 61321505 (+) |
| G67826 | NA | non-coding | downstream | 63434 | 61326786 ~ 61327148 (+) |
| G66188 | NA | other | upstream | 1305128 | 59941486 ~ 59942064 (+) |
| G65442 | NA | other | upstream | 1922063 | 59324636 ~ 59325129 (+) |
| G64338 | NA | other | upstream | 2546813 | 58699296 ~ 58700379 (+) |
| G64315 | NA | other | upstream | 2581286 | 58665334 ~ 58665906 (+) |
| G64292 | NA | other | upstream | 2659607 | 58586858 ~ 58587585 (+) |
| G67806 | LOC106581772 | other | downstream | 51522 | 61314874 ~ 61315252 (+) |
| G67930 | mcmbp | other | downstream | 466413 | 61729765 ~ 61733388 (+) |
| G70011 | NA | other | downstream | 2011611 | 63274963 ~ 63275296 (+) |
| LOC110526969 | stk32c | other | downstream | 3546237 | 64809255 ~ 64946164 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 4652383 | 65915581 ~ 65922285 (+) |
