G67566


Basic Information

Item Value
gene id G67566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61271630 ~ 61281369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU74799
GCCACGCCTAGCGCACCAAATACACCAATCCGAGTGTCCCTCTTCCAGTTGGGGTAGGTCTTATTGTAGTAATCCTCCGCGTCATTggtccagtcactcagccagaGGTTCTGACCAATGAAAGCAACGTTCTGGATGAAGTACACTAGGAAGAACATGGTGGAGTAGCCCCAGCCCATTGCACGTAGGTACTGGAGATACACCGAGAACTTCAcCTGTCCCGTCTCCATGGTTTCCTTCTCGATCAGCCTCTGGCCTTTCTTGGTCTCGTCATCAGCAGGTGGCTTCGGTTTCTTTAGGGAACTGTTCTTTCTCAACCTAACacttcCATTGCGTTGGCTGCGTCGGATgctgctctctctcctcagggTCATTGAGACGATGTCTTCAGGAGGGGTGTCGGCCTGAGGATCCTGTAAATCAGGGACTAGCCCCACCTCCTCACCATCAGAGGTTGGATcagtgTGTTTCTTGCCCTCGTCTTT
>TU74800
GCCACGCCTAGCGCACCAAATACACCAATCCGAGTGTCCCTCTTCCAGTTGGGGTAGGTCTTATTGTAGTAATCCTCCGCGTCATTggtccagtcactcagccagaGGTTCTGACCAATGAAAGCAACGTTCTGGATGAAGTACACTAGGAAGAACATGGTGGAGTAGCCCCAGCCCATTGCACGTAGGTACTGGAGATACACCGAGAACTTCAcCTGTCCCGTCTCCATGGTTTCCTTCTCGATCAGCCTCTGGCCTTTCTTGGTCTCGTCATCAGCAGGTGGCTTCGGTTTCTTTAGGGAACTGTTCTTTCTCAACCTAACactgggaaacacacacacacacacacacagagagatcgtGAGAAGAGGTGTGTTGATGGAGAAAATGTGAGGAAAGTGTGAGTGTATATTTGATAATAAACACAAACACTTAAATGTCAGTGGCATTGGAGGAGAAAATGTTATGAAGTTGGAATGAACTAATAAAAAATTCTCACTGTAGAAGATGGAAGGATGGGAAAGAGAGAAGATGGAGTCATTCACAAATGATGTAATAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU74799 False 485 lncRNA 0.53 4 61271630 61281369
TU74800 True 561 lncRNA 0.45 2 61271630 61273581

Neighbor

gene id symbol gene type direction distance location
LOC110526122 LOC106576844 coding upstream 44505 61117250 ~ 61227125 (+)
LOC110526134 NA coding upstream 139625 61091580 ~ 61132005 (+)
prdm8 LOC106576848 coding upstream 770012 60496970 ~ 60501618 (+)
rrp12 rrp12 coding upstream 843919 60403081 ~ 60427711 (+)
LOC110521558 LOC106576852 coding upstream 880004 60374052 ~ 60391626 (+)
lrrfip2 lrrfip2 coding downstream 60736 61342105 ~ 61401807 (+)
LOC110526206 fam83h coding downstream 156238 61437607 ~ 61488427 (+)
LOC110526212 LOC106576837 coding downstream 219645 61501014 ~ 61505305 (+)
herc4 herc4 coding downstream 236584 61517953 ~ 61540937 (+)
LOC110526236 sirt1 coding downstream 267812 61549181 ~ 61561338 (+)
G67567 mrp2 non-coding upstream 8278 61247192 ~ 61263352 (+)
G67595 NA non-coding upstream 26387 61243450 ~ 61245243 (+)
G67594 NA non-coding upstream 29753 61241562 ~ 61241877 (+)
G67593 NA non-coding upstream 30495 61240837 ~ 61241135 (+)
G67592 NA non-coding upstream 31022 61240232 ~ 61240608 (+)
G67622 mrp2 non-coding downstream 18807 61300176 ~ 61302265 (+)
G67812 NA non-coding downstream 38224 61319593 ~ 61319867 (+)
G67821 NA non-coding downstream 39844 61321213 ~ 61321505 (+)
G67826 NA non-coding downstream 45417 61326786 ~ 61327148 (+)
G67828 NA non-coding downstream 55257 61336626 ~ 61336958 (+)
G66188 NA other upstream 1329566 59941486 ~ 59942064 (+)
G65442 NA other upstream 1946501 59324636 ~ 59325129 (+)
G64338 NA other upstream 2571251 58699296 ~ 58700379 (+)
G64315 NA other upstream 2605724 58665334 ~ 58665906 (+)
G64292 NA other upstream 2684045 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 33505 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 448396 61729765 ~ 61733388 (+)
G70011 NA other downstream 1993594 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 3528220 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 4634366 65915581 ~ 65922285 (+)

Expression


Co-expression Network