Gene
RNA
| Item | Value |
|---|---|
| gene id | G68771 |
| gene name | mypn |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 61598472 ~ 61598708 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mypn | Is expressed in heart. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1KK and nemaline myopathy 11. Orthologous to human MYPN (myopalladin). |
| description |
|---|
| myopalladin-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU76120 | True | 237 | lncRNA | 0.45 | 1 | 61598472 | 61598708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnajc12 | djc12 | coding | downstream | 49556 | 61544678 ~ 61548916 (-) |
| LOC110526243 | LOC106576835 | coding | downstream | 54225 | 61541684 ~ 61544247 (-) |
| LOC110526202 | LOC106576840 | coding | downstream | 169354 | 61418379 ~ 61429118 (-) |
| mlh1 | mlh1 | coding | downstream | 180398 | 61403030 ~ 61418074 (-) |
| abcc2 | mrp2 | coding | downstream | 286495 | 61246276 ~ 61311977 (-) |
| tial1 | tial1 | coding | upstream | 53600 | 61652308 ~ 61676942 (-) |
| LOC110526339 | mcmbp | coding | upstream | 118746 | 61717454 ~ 61733606 (-) |
| csgalnact2 | cgat2 | coding | upstream | 148095 | 61746803 ~ 61755455 (-) |
| ret | LOC106576823 | coding | upstream | 159662 | 61758370 ~ 61789952 (-) |
| si:dkey-192p21.6 | LOC106576822 | coding | upstream | 198358 | 61797066 ~ 61840583 (-) |
| G68764 | NA | non-coding | downstream | 11466 | 61586786 ~ 61587006 (-) |
| G68760 | NA | non-coding | downstream | 17726 | 61580538 ~ 61580746 (-) |
| G68758 | NA | non-coding | downstream | 20261 | 61577734 ~ 61578211 (-) |
| G68755 | mypn | non-coding | downstream | 22890 | 61574429 ~ 61575582 (-) |
| G68752 | NA | non-coding | downstream | 25268 | 61572801 ~ 61573204 (-) |
| G68779 | mypn | non-coding | upstream | 9815 | 61608523 ~ 61609266 (-) |
| G68782 | mypn | non-coding | upstream | 13693 | 61612401 ~ 61613659 (-) |
| G68784 | mypn | non-coding | upstream | 18496 | 61617204 ~ 61617665 (-) |
| G68785 | NA | non-coding | upstream | 20332 | 61619040 ~ 61619245 (-) |
| G68787 | NA | non-coding | upstream | 20790 | 61619498 ~ 61620050 (-) |
| LOC110526097 | LOC106576849 | other | downstream | 1137238 | 60430184 ~ 60495300 (-) |
| LOC110525695 | LOC106576879 | other | downstream | 2443327 | 59144373 ~ 59199471 (-) |
| G65147 | NA | other | downstream | 2812855 | 58784742 ~ 58785617 (-) |
| G63328 | NA | other | downstream | 4199984 | 57397194 ~ 57398488 (-) |
| G63093 | NA | other | downstream | 4535624 | 57035667 ~ 57062848 (-) |
| G68736 | NA | other | upstream | 83570 | 61682278 ~ 61686308 (-) |
| LOC110526417 | LOC106576819 | other | upstream | 383023 | 61981652 ~ 61983330 (-) |
| G69210 | NA | other | upstream | 812814 | 62411522 ~ 62418296 (-) |
| G70013 | NA | other | upstream | 1678500 | 63277208 ~ 63277752 (-) |
| LOC110526867 | LOC100136521 | other | upstream | 2771194 | 64369803 ~ 64384521 (-) |
