G68779 (mypn)


Basic Information

Item Value
gene id G68779
gene name mypn
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61608523 ~ 61609266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU76128
CTCACAGTTTGGGCTTGGCCAGGACTGGAGGTGGTTCCTTATTGGCCAACTGTGACATATCGTCATATGAATGGCTATCGGATGTTTCACTCTCGTTGTCTGTTTCATTCTCAGGCAGTTTAAAGTGCACACGGAGGCCTACCCTGGAGCTGGACCTGGGCCCGTTGTGGCTCACCAGAACCCCAGGCTTGAGGCAAGAGGAGGTGGGGGGATCAGGGAGGTTTACAGGGGGAGGGGGCTCAGGTTTATGGAAAGGAGTCCCTTCCACCTTAGGACTCAGACCAACGGCAGGGTCTGATAACACTGAGAAGGCTCTGGAGTCTTCATGGTCAGTCTTGGGCTCAGGAAGTTCCCTGCTGGAGCTAGTAGACAGATCTGAGTGAGGGGTGCTCAGGTAGAGTGGATCCAGACAAGATGTGCTGGAGCTACGGGTGCCTATCCTGGGGCTGCTGCCCAGGATTAGTGGGTCCAGACTGGGCATGCTGATGCTGACAGGGTCCTGGCGCAGCATGCTGGAGCTCAGAGGATCTAGACGGAGGGTACTGGTGCTCAGAGGGTCCAGTCGTAACGTGCTGGAACTGAGCGGATCCAGGCGGATGGTGTTGGAGTGAGGCTTGATGCTGTTGGTCACAGGAACCTCAGCTTGAGGCTTTAGACTGGGAGGAGTGAGATCTAATGAAGAGGGCTCTGGGACTTGTGTGGACTTGTGTGGAGTTTTCAcgtggttgttgttggtgttatCAT

Function

symbol description
mypn Is expressed in heart. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1KK and nemaline myopathy 11. Orthologous to human MYPN (myopalladin).

NR:

description
myopalladin-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76128 True 744 lncRNA 0.59 1 61608523 61609266

Neighbor

gene id symbol gene type direction distance location
dnajc12 djc12 coding downstream 59607 61544678 ~ 61548916 (-)
LOC110526243 LOC106576835 coding downstream 64276 61541684 ~ 61544247 (-)
LOC110526202 LOC106576840 coding downstream 179405 61418379 ~ 61429118 (-)
mlh1 mlh1 coding downstream 190449 61403030 ~ 61418074 (-)
abcc2 mrp2 coding downstream 296546 61246276 ~ 61311977 (-)
tial1 tial1 coding upstream 43042 61652308 ~ 61676942 (-)
LOC110526339 mcmbp coding upstream 108188 61717454 ~ 61733606 (-)
csgalnact2 cgat2 coding upstream 137537 61746803 ~ 61755455 (-)
ret LOC106576823 coding upstream 149104 61758370 ~ 61789952 (-)
si:dkey-192p21.6 LOC106576822 coding upstream 187800 61797066 ~ 61840583 (-)
G68771 mypn non-coding downstream 9815 61598472 ~ 61598708 (-)
G68764 NA non-coding downstream 21517 61586786 ~ 61587006 (-)
G68760 NA non-coding downstream 27777 61580538 ~ 61580746 (-)
G68758 NA non-coding downstream 30312 61577734 ~ 61578211 (-)
G68755 mypn non-coding downstream 32941 61574429 ~ 61575582 (-)
G68782 mypn non-coding upstream 3135 61612401 ~ 61613659 (-)
G68784 mypn non-coding upstream 7938 61617204 ~ 61617665 (-)
G68785 NA non-coding upstream 9774 61619040 ~ 61619245 (-)
G68787 NA non-coding upstream 10232 61619498 ~ 61620050 (-)
G68808 NA non-coding upstream 38672 61647938 ~ 61648163 (-)
LOC110526097 LOC106576849 other downstream 1147289 60430184 ~ 60495300 (-)
LOC110525695 LOC106576879 other downstream 2453378 59144373 ~ 59199471 (-)
G65147 NA other downstream 2822906 58784742 ~ 58785617 (-)
G63328 NA other downstream 4210035 57397194 ~ 57398488 (-)
G63093 NA other downstream 4545675 57035667 ~ 57062848 (-)
G68736 NA other upstream 73012 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 372465 61981652 ~ 61983330 (-)
G69210 NA other upstream 802256 62411522 ~ 62418296 (-)
G70013 NA other upstream 1667942 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 2760636 64369803 ~ 64384521 (-)

Expression


Co-expression Network