G68782 (mypn)


Basic Information

Item Value
gene id G68782
gene name mypn
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61612401 ~ 61613659 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU76131
GGGCACTCCTGGGCAGGCCCATCGAGTTGGTGGCTTGTGTGGTGTGTAGAGAGGGCAGGACAGAGCTGAGGAAGGCCACATGGTTCTGGATGGGGCTGGGGGTGGAGGTGCTGGAGGTCGGGGACGCTGCCTGTGGGGGTGACTGCTGTGGCAGGGTGAACACAGAGTTGAGGTAGGCAGCAGGCAAAAGggtgggggaggtgggggaggacaTGAAGGAAGGGGGGCTAGTGGGTGACTTGAGGACTCTGGTGGGGAAGACTCTGGGTTGTGGAGAGAACAGGTTGGGGTTGGAGGAGTTGAGCTCGGCAGCCAGCTCGTGGAGCAACGGAACTGGGGACTCTGTAGGGGAGGGACTCCTGACTGGAGAGAGGGGAGTCTGGGCAGTGATAAACTCTTTTGGCCTAGCATAGTTGAAGCTCTGTGAAATGGGAGCCAGGTTGAGGAGGGAGGCATGAGTTGTTctgagaaggggggagggggaggtgttCTGCATGGTTGTAGGGGCCCTGTTGAAAGCTGCAGGGATGGAGCTGAGAGTTGCTGTGGGGGCTGTATTCAGATGAGGTATGAGAGGTGTGTTAAACTGGGGTACGTGAATAGATTTAGGCAGGGATAAGGGGGCTAAGTTCAGCTGGGAAGAATGGGTGGTGTTTTGCAGGGTCATATAgggtggggatgcagggctggTATGCAGGTGGGGTGCAGGAACAGTACTCAGCAGAGGGGCAGATGGAGGGGAGCTCATACAAGATGAAGCTGTCTTCAGTTGAGGAGGGGATGGCAGGGTACCCATAATGGGTGCAGGAGGGGCTGTGTTCAGTAGTAGTGCAGAGGTAGTGTTTATTGGTGGTACAGGGCTTGTGTTTAGCAGGggtgaagaagaagaaagaaaataAGATTGGGTTGCGTATGGGTTCAGTAGTGGTGCAGAGGCAATGTTAAGCAGAGGTGCAGGGGCATTAGTGTTTAGCTGGGTTGCAGGGGTAGTGTTCAGTGTTGTCACAGGGGTGAAGTTGAGTAAGGGTGTTGGGGCTATGGTCAGTATGGGTGCGGGGTGGGTGGACTGCAGGGGCATGGGGGTAGATGAACGGGGTAGGCTTTGCTGgtgctggagctggggctggggctcaGGTTGCTTCCGGGCTGGCCAGGCAGATGCCTCCGGTTGACTCTGGGTGGCTCCGGTTGGCTCAGTGTCAGTCTGCTGCTGCTCCATAAGCACCTGGTTGTGTAGAAGCTGCAGCTGGACAGGGTCT

Function

symbol description
mypn Is expressed in heart. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1KK and nemaline myopathy 11. Orthologous to human MYPN (myopalladin).

NR:

description
myopalladin-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76131 True 1259 lncRNA 0.57 1 61612401 61613659

Neighbor

gene id symbol gene type direction distance location
dnajc12 djc12 coding downstream 63485 61544678 ~ 61548916 (-)
LOC110526243 LOC106576835 coding downstream 68154 61541684 ~ 61544247 (-)
LOC110526202 LOC106576840 coding downstream 183283 61418379 ~ 61429118 (-)
mlh1 mlh1 coding downstream 194327 61403030 ~ 61418074 (-)
abcc2 mrp2 coding downstream 300424 61246276 ~ 61311977 (-)
tial1 tial1 coding upstream 38649 61652308 ~ 61676942 (-)
LOC110526339 mcmbp coding upstream 103795 61717454 ~ 61733606 (-)
csgalnact2 cgat2 coding upstream 133144 61746803 ~ 61755455 (-)
ret LOC106576823 coding upstream 144711 61758370 ~ 61789952 (-)
si:dkey-192p21.6 LOC106576822 coding upstream 183407 61797066 ~ 61840583 (-)
G68779 mypn non-coding downstream 3135 61608523 ~ 61609266 (-)
G68771 mypn non-coding downstream 13693 61598472 ~ 61598708 (-)
G68764 NA non-coding downstream 25395 61586786 ~ 61587006 (-)
G68760 NA non-coding downstream 31655 61580538 ~ 61580746 (-)
G68758 NA non-coding downstream 34190 61577734 ~ 61578211 (-)
G68784 mypn non-coding upstream 3545 61617204 ~ 61617665 (-)
G68785 NA non-coding upstream 5381 61619040 ~ 61619245 (-)
G68787 NA non-coding upstream 5839 61619498 ~ 61620050 (-)
G68808 NA non-coding upstream 34279 61647938 ~ 61648163 (-)
G68740 NA non-coding upstream 64159 61677818 ~ 61678103 (-)
LOC110526097 LOC106576849 other downstream 1151167 60430184 ~ 60495300 (-)
LOC110525695 LOC106576879 other downstream 2457256 59144373 ~ 59199471 (-)
G65147 NA other downstream 2826784 58784742 ~ 58785617 (-)
G63328 NA other downstream 4213913 57397194 ~ 57398488 (-)
G63093 NA other downstream 4549553 57035667 ~ 57062848 (-)
G68736 NA other upstream 68619 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 368072 61981652 ~ 61983330 (-)
G69210 NA other upstream 797863 62411522 ~ 62418296 (-)
G70013 NA other upstream 1663549 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 2756243 64369803 ~ 64384521 (-)

Expression


Co-expression Network