Gene
RNA
| Item | Value |
|---|---|
| gene id | G68784 |
| gene name | mypn |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 61617204 ~ 61617665 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mypn | Is expressed in heart. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1KK and nemaline myopathy 11. Orthologous to human MYPN (myopalladin). |
| description |
|---|
| myopalladin-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU76133 | True | 462 | lncRNA | 0.41 | 1 | 61617204 | 61617665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnajc12 | djc12 | coding | downstream | 68288 | 61544678 ~ 61548916 (-) |
| LOC110526243 | LOC106576835 | coding | downstream | 72957 | 61541684 ~ 61544247 (-) |
| LOC110526202 | LOC106576840 | coding | downstream | 188086 | 61418379 ~ 61429118 (-) |
| mlh1 | mlh1 | coding | downstream | 199130 | 61403030 ~ 61418074 (-) |
| abcc2 | mrp2 | coding | downstream | 305227 | 61246276 ~ 61311977 (-) |
| tial1 | tial1 | coding | upstream | 34643 | 61652308 ~ 61676942 (-) |
| LOC110526339 | mcmbp | coding | upstream | 99789 | 61717454 ~ 61733606 (-) |
| csgalnact2 | cgat2 | coding | upstream | 129138 | 61746803 ~ 61755455 (-) |
| ret | LOC106576823 | coding | upstream | 140705 | 61758370 ~ 61789952 (-) |
| si:dkey-192p21.6 | LOC106576822 | coding | upstream | 179401 | 61797066 ~ 61840583 (-) |
| G68782 | mypn | non-coding | downstream | 3545 | 61612401 ~ 61613659 (-) |
| G68779 | mypn | non-coding | downstream | 7938 | 61608523 ~ 61609266 (-) |
| G68771 | mypn | non-coding | downstream | 18496 | 61598472 ~ 61598708 (-) |
| G68764 | NA | non-coding | downstream | 30198 | 61586786 ~ 61587006 (-) |
| G68760 | NA | non-coding | downstream | 36458 | 61580538 ~ 61580746 (-) |
| G68785 | NA | non-coding | upstream | 1375 | 61619040 ~ 61619245 (-) |
| G68787 | NA | non-coding | upstream | 1833 | 61619498 ~ 61620050 (-) |
| G68808 | NA | non-coding | upstream | 30273 | 61647938 ~ 61648163 (-) |
| G68740 | NA | non-coding | upstream | 60153 | 61677818 ~ 61678103 (-) |
| G68741 | NA | non-coding | upstream | 60526 | 61678191 ~ 61679786 (-) |
| LOC110526097 | LOC106576849 | other | downstream | 1155970 | 60430184 ~ 60495300 (-) |
| LOC110525695 | LOC106576879 | other | downstream | 2462059 | 59144373 ~ 59199471 (-) |
| G65147 | NA | other | downstream | 2831587 | 58784742 ~ 58785617 (-) |
| G63328 | NA | other | downstream | 4218716 | 57397194 ~ 57398488 (-) |
| G63093 | NA | other | downstream | 4554356 | 57035667 ~ 57062848 (-) |
| G68736 | NA | other | upstream | 64613 | 61682278 ~ 61686308 (-) |
| LOC110526417 | LOC106576819 | other | upstream | 364066 | 61981652 ~ 61983330 (-) |
| G69210 | NA | other | upstream | 793857 | 62411522 ~ 62418296 (-) |
| G70013 | NA | other | upstream | 1659543 | 63277208 ~ 63277752 (-) |
| LOC110526867 | LOC100136521 | other | upstream | 2752237 | 64369803 ~ 64384521 (-) |
