Gene
RNA
| Item | Value |
|---|---|
| gene id | G68114 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 61958813 ~ 61959077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sorbin and SH3 domain-containing protein 1-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU75385 | True | 265 | lncRNA | 0.45 | 1 | 61958813 | 61959077 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sec23ip | LOC106576824 | coding | upstream | 213656 | 61733628 ~ 61745157 (+) |
| inpp5f | LOC106576825 | coding | upstream | 248744 | 61687566 ~ 61710069 (+) |
| bag3 | bag3 | coding | upstream | 274645 | 61677780 ~ 61684168 (+) |
| pkd2l1 | pkd2l1 | coding | upstream | 312632 | 61635163 ~ 61646181 (+) |
| atoh7 | atoh7 | coding | upstream | 327286 | 61629925 ~ 61631527 (+) |
| fam204a | LOC106576816 | coding | downstream | 105173 | 62064250 ~ 62097505 (+) |
| LOC110526440 | LOC106576815 | coding | downstream | 194272 | 62153349 ~ 62168687 (+) |
| LOC110526492 | LOC106576813 | coding | downstream | 401912 | 62360989 ~ 62366199 (+) |
| LOC110526511 | LOC100194723 | coding | downstream | 424613 | 62383690 ~ 62390008 (+) |
| LOC110526533 | LOC106576809 | coding | downstream | 476205 | 62435282 ~ 62492911 (+) |
| G68112 | NA | non-coding | upstream | 3033 | 61954113 ~ 61955780 (+) |
| G68046 | NA | non-coding | upstream | 10080 | 61832025 ~ 61948733 (+) |
| G68076 | LOC106576818 | non-coding | upstream | 19205 | 61937520 ~ 61939608 (+) |
| G68075 | NA | non-coding | upstream | 32664 | 61921074 ~ 61926149 (+) |
| G68105 | pdli1 | non-coding | upstream | 42259 | 61902275 ~ 61916554 (+) |
| G68116 | NA | non-coding | downstream | 1950 | 61961027 ~ 61961228 (+) |
| G68117 | NA | non-coding | downstream | 4099 | 61963176 ~ 61963472 (+) |
| G68118 | NA | non-coding | downstream | 5160 | 61964237 ~ 61964752 (+) |
| G68119 | NA | non-coding | downstream | 5737 | 61964814 ~ 61965178 (+) |
| G68127 | NA | non-coding | downstream | 16804 | 61975881 ~ 61976097 (+) |
| G67930 | mcmbp | other | upstream | 225425 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 643561 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 2016749 | 59941486 ~ 59942064 (+) |
| G65442 | NA | other | upstream | 2633684 | 59324636 ~ 59325129 (+) |
| G64338 | NA | other | upstream | 3258434 | 58699296 ~ 58700379 (+) |
| G70011 | NA | other | downstream | 1315886 | 63274963 ~ 63275296 (+) |
| LOC110526969 | stk32c | other | downstream | 2850512 | 64809255 ~ 64946164 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 3956658 | 65915581 ~ 65922285 (+) |
| G73515 | NA | other | downstream | 4328602 | 66287679 ~ 66288469 (+) |
| LOC118965274 | LOC106576739 | other | downstream | 4461418 | 66417495 ~ 66424081 (+) |
