Gene
RNA
| Item | Value |
|---|---|
| gene id | G70013 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 63277208 ~ 63277752 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU77510 | True | 545 | TUCP | 0.36 | 1 | 63277208 | 63277752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccnj | ccnj | coding | downstream | 10663 | 63245450 ~ 63266545 (-) |
| LOC110526655 | LOC106576794 | coding | downstream | 53524 | 63148644 ~ 63223684 (-) |
| march5b | march5b | coding | downstream | 201868 | 63031594 ~ 63075340 (-) |
| LOC110532536 | LOC106576798 | coding | downstream | 302344 | 62954227 ~ 62974864 (-) |
| LOC110526605 | LOC106576802 | coding | downstream | 454140 | 62751363 ~ 62823068 (-) |
| blnk | LOC106576789 | coding | upstream | 15608 | 63293360 ~ 63325494 (-) |
| vent | LOC106576918 | coding | upstream | 347082 | 63624834 ~ 63625877 (-) |
| vox | LOC106576785 | coding | upstream | 350483 | 63628235 ~ 63630418 (-) |
| LOC110532553 | LOC106576784 | coding | upstream | 352818 | 63630570 ~ 63654636 (-) |
| LOC110526802 | LOC106576784 | coding | upstream | 376799 | 63654551 ~ 63679213 (-) |
| G70009 | NA | non-coding | downstream | 5282 | 63271697 ~ 63271926 (-) |
| G70007 | NA | non-coding | downstream | 5999 | 63270817 ~ 63271209 (-) |
| G70004 | NA | non-coding | downstream | 7660 | 63269127 ~ 63269548 (-) |
| G70002 | NA | non-coding | downstream | 9305 | 63267643 ~ 63267903 (-) |
| G69992 | NA | non-coding | downstream | 20503 | 63256313 ~ 63256705 (-) |
| G70150 | NA | non-coding | upstream | 50301 | 63328053 ~ 63328315 (-) |
| G70151 | NA | non-coding | upstream | 54776 | 63332528 ~ 63332817 (-) |
| G70350 | NA | non-coding | upstream | 281594 | 63559346 ~ 63559634 (-) |
| G70352 | NA | non-coding | upstream | 284776 | 63562528 ~ 63562908 (-) |
| G70385 | NA | non-coding | upstream | 338304 | 63616056 ~ 63616261 (-) |
| G69210 | NA | other | downstream | 858912 | 62411522 ~ 62418296 (-) |
| LOC110526417 | LOC106576819 | other | downstream | 1294813 | 61981652 ~ 61983330 (-) |
| G68736 | NA | other | downstream | 1590900 | 61682278 ~ 61686308 (-) |
| LOC110526097 | LOC106576849 | other | downstream | 2815974 | 60430184 ~ 60495300 (-) |
| LOC110525695 | LOC106576879 | other | downstream | 4122063 | 59144373 ~ 59199471 (-) |
| LOC110526867 | LOC100136521 | other | upstream | 1092150 | 64369803 ~ 64384521 (-) |
| tjap1 | tjap1 | other | upstream | 3541092 | 66806836 ~ 66883731 (-) |
| LOC110527436 | ppp2r5d | other | upstream | 3716930 | 66965664 ~ 67010646 (-) |
| LOC110527584 | LOC106576720 | other | upstream | 4108757 | 67386509 ~ 67389299 (-) |
| LOC110527687 | sncg | other | upstream | 4391837 | 67669589 ~ 67681775 (-) |
