Gene
RNA
| Item | Value |
|---|---|
| gene id | G70012 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 63277369 ~ 63277799 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU77509 | True | 431 | lncRNA | 0.39 | 1 | 63277369 | 63277799 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965245 | LOC106576791 | coding | upstream | 31924 | 63239050 ~ 63245445 (+) |
| LOC110526701 | LOC106576791 | coding | upstream | 38132 | 63225088 ~ 63239237 (+) |
| LOC110526678 | LOC106576796 | coding | upstream | 131825 | 63075377 ~ 63145544 (+) |
| ide | LOC106576795 | coding | upstream | 246748 | 62983943 ~ 63030621 (+) |
| LOC110526643 | LOC106576799 | coding | upstream | 329297 | 62923989 ~ 62948072 (+) |
| LOC110526727 | LOC106576790 | coding | downstream | 5528 | 63283327 ~ 63292127 (+) |
| LOC110526770 | LOC106576788 | coding | downstream | 46103 | 63323902 ~ 63499450 (+) |
| LOC110526778 | LOC106576786 | coding | downstream | 287704 | 63565503 ~ 63598806 (+) |
| LOC110526795 | NA | coding | downstream | 342438 | 63620237 ~ 63621429 (+) |
| LOC118965254 | NA | coding | downstream | 703334 | 63980371 ~ 63998531 (+) |
| G70008 | NA | non-coding | upstream | 5206 | 63271844 ~ 63272163 (+) |
| G70006 | NA | non-coding | upstream | 6160 | 63270908 ~ 63271209 (+) |
| G70003 | NA | non-coding | upstream | 9020 | 63268145 ~ 63268349 (+) |
| G69835 | NA | non-coding | upstream | 28063 | 63248967 ~ 63249306 (+) |
| G69829 | LOC106576794 | non-coding | upstream | 56397 | 63220026 ~ 63220972 (+) |
| G70021 | LOC106576789 | non-coding | downstream | 22143 | 63299942 ~ 63313337 (+) |
| G70028 | NA | non-coding | downstream | 44710 | 63322509 ~ 63322810 (+) |
| G70034 | NA | non-coding | downstream | 50054 | 63327853 ~ 63328057 (+) |
| G70035 | NA | non-coding | downstream | 53088 | 63330887 ~ 63331217 (+) |
| G70011 | NA | other | upstream | 2073 | 63274963 ~ 63275296 (+) |
| G67930 | mcmbp | other | upstream | 1543981 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 1962117 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 3335305 | 59941486 ~ 59942064 (+) |
| G65442 | NA | other | upstream | 3952240 | 59324636 ~ 59325129 (+) |
| LOC110526969 | stk32c | other | downstream | 1531790 | 64809255 ~ 64946164 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 2637936 | 65915581 ~ 65922285 (+) |
| G73515 | NA | other | downstream | 3009880 | 66287679 ~ 66288469 (+) |
| LOC118965274 | LOC106576739 | other | downstream | 3142696 | 66417495 ~ 66424081 (+) |
| G74067 | LOC106576735 | other | downstream | 3478408 | 66756207 ~ 66758984 (+) |
