G70035


Basic Information

Item Value
gene id G70035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 63330887 ~ 63331217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU77533
gtatagtctaccccgggagggggtggttcccggaaggagatcaatactacaatcatacgaccggtgtggaggaagagaggtggccctggaccgactgaacaccgtgcgcagatcgtgatattcctctggcacccctgtcaaatcaccaggctcctcctgtgaagaagagacagaggaaacaggagggatagcagacattaaacatttcacatgacaagagacgttccaggagaggatagaattactagaccaattaatggaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaattaaaaaa

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77533 True 331 lncRNA 0.48 1 63330887 63331217

Neighbor

gene id symbol gene type direction distance location
LOC110526727 LOC106576790 coding upstream 40986 63283327 ~ 63292127 (+)
LOC118965245 LOC106576791 coding upstream 85442 63239050 ~ 63245445 (+)
LOC110526701 LOC106576791 coding upstream 91650 63225088 ~ 63239237 (+)
LOC110526678 LOC106576796 coding upstream 185343 63075377 ~ 63145544 (+)
ide LOC106576795 coding upstream 300266 62983943 ~ 63030621 (+)
LOC110526778 LOC106576786 coding downstream 234286 63565503 ~ 63598806 (+)
LOC110526795 NA coding downstream 289020 63620237 ~ 63621429 (+)
LOC118965254 NA coding downstream 649916 63980371 ~ 63998531 (+)
LOC110526877 LOC106576777 coding downstream 1137306 64468523 ~ 64471084 (+)
LOC110526912 LOC106576775 coding downstream 1442698 64773915 ~ 64783737 (+)
G70034 NA non-coding upstream 2830 63327853 ~ 63328057 (+)
G70028 NA non-coding upstream 8077 63322509 ~ 63322810 (+)
G70021 LOC106576789 non-coding upstream 17550 63299942 ~ 63313337 (+)
G70012 NA non-coding upstream 53088 63277369 ~ 63277799 (+)
G70267 NA non-coding downstream 178835 63510052 ~ 63510427 (+)
G70282 NA non-coding downstream 189348 63520565 ~ 63520959 (+)
G70284 NA non-coding downstream 192869 63524086 ~ 63529066 (+)
G70300 NA non-coding downstream 224392 63555609 ~ 63555849 (+)
G70399 NA non-coding downstream 297051 63628268 ~ 63628595 (+)
G70011 NA other upstream 55591 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 1597499 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 2015635 61314874 ~ 61315252 (+)
G66188 NA other upstream 3388823 59941486 ~ 59942064 (+)
G65442 NA other upstream 4005758 59324636 ~ 59325129 (+)
LOC110526969 stk32c other downstream 1478372 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 2584518 65915581 ~ 65922285 (+)
G73515 NA other downstream 2956462 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 3089278 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 3424990 66756207 ~ 66758984 (+)

Expression


Co-expression Network