Gene
RNA
| Item | Value |
|---|---|
| gene id | G71204 |
| gene name | LOC106585892 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 64246145 ~ 64246373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78755 | True | 229 | lncRNA | 0.47 | 1 | 64246145 | 64246373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526858 | LOC106604947 | coding | downstream | 131421 | 64049113 ~ 64114724 (-) |
| LOC110526836 | LOC106576780 | coding | downstream | 265430 | 63694607 ~ 63980715 (-) |
| LOC110526802 | LOC106576784 | coding | downstream | 566932 | 63654551 ~ 63679213 (-) |
| LOC110532553 | LOC106576784 | coding | downstream | 591509 | 63630570 ~ 63654636 (-) |
| vox | LOC106576785 | coding | downstream | 615727 | 63628235 ~ 63630418 (-) |
| LOC110526867 | LOC100136521 | coding | upstream | 123430 | 64369803 ~ 64384521 (-) |
| LOC110526894 | LOC106605012 | coding | upstream | 226029 | 64472402 ~ 64735581 (-) |
| LOC110526927 | LOC106576773 | coding | upstream | 545987 | 64792360 ~ 64801660 (-) |
| LOC110526944 | lrrc27 | coding | upstream | 556019 | 64802392 ~ 64809629 (-) |
| LOC110526980 | LOC106576770 | coding | upstream | 705469 | 64951842 ~ 64957672 (-) |
| G71183 | NA | non-coding | downstream | 17118 | 64228818 ~ 64229027 (-) |
| G71110 | NA | non-coding | downstream | 72795 | 64173125 ~ 64173350 (-) |
| G71107 | NA | non-coding | downstream | 75135 | 64170611 ~ 64171010 (-) |
| G70769 | NA | non-coding | downstream | 421671 | 63824267 ~ 63824474 (-) |
| G70753 | NA | non-coding | downstream | 438060 | 63807820 ~ 63808085 (-) |
| G71208 | NA | non-coding | upstream | 2164 | 64248537 ~ 64248808 (-) |
| G71450 | NA | non-coding | upstream | 195599 | 64441972 ~ 64442508 (-) |
| G72176 | NA | non-coding | upstream | 292162 | 64538535 ~ 64539137 (-) |
| G72236 | NA | non-coding | upstream | 398111 | 64644484 ~ 64647187 (-) |
| G70013 | NA | other | downstream | 968393 | 63277208 ~ 63277752 (-) |
| G69210 | NA | other | downstream | 1827849 | 62411522 ~ 62418296 (-) |
| LOC110526417 | LOC106576819 | other | downstream | 2263750 | 61981652 ~ 61983330 (-) |
| G68736 | NA | other | downstream | 2559837 | 61682278 ~ 61686308 (-) |
| LOC110526097 | LOC106576849 | other | downstream | 3784911 | 60430184 ~ 60495300 (-) |
| tjap1 | tjap1 | other | upstream | 2572471 | 66806836 ~ 66883731 (-) |
| LOC110527436 | ppp2r5d | other | upstream | 2748309 | 66965664 ~ 67010646 (-) |
| LOC110527584 | LOC106576720 | other | upstream | 3140136 | 67386509 ~ 67389299 (-) |
| LOC110527687 | sncg | other | upstream | 3423216 | 67669589 ~ 67681775 (-) |
