G72176


Basic Information

Item Value
gene id G72176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 64538535 ~ 64539137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU79779
cagagtccctgggttcgcgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcatccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctagccaaggttgccaggtgcacggtgtagcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtacggctggttgggttgtgtatcggaggacgcatgacattcagccttcgtctctcccgagcccgtacgggagttgtagcaatgagacaagatagtagctactacaacaattggataccac
>TU79780
cagagtccctgggttcgcgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgaccacaattggcctagcgtcatccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctagccaaggttgccaggtgcacggtgtagcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtacggctggttgggttgtgtatcggaggacgcatgacattcagccttcgtctctcccgagcccgtacgggagttgtagcaatgagacaagatagtagctactacaacaattggataccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79779 False 383 lncRNA 0.61 2 64538535 64539137
TU79780 True 382 lncRNA 0.61 2 64538535 64539137

Neighbor

gene id symbol gene type direction distance location
LOC110526867 LOC100136521 coding downstream 154014 64369803 ~ 64384521 (-)
LOC110526858 LOC106604947 coding downstream 423811 64049113 ~ 64114724 (-)
LOC110526836 LOC106576780 coding downstream 557820 63694607 ~ 63980715 (-)
LOC110526802 LOC106576784 coding downstream 859322 63654551 ~ 63679213 (-)
LOC110532553 LOC106576784 coding downstream 883899 63630570 ~ 63654636 (-)
LOC110526927 LOC106576773 coding upstream 253223 64792360 ~ 64801660 (-)
LOC110526944 lrrc27 coding upstream 263255 64802392 ~ 64809629 (-)
LOC110526980 LOC106576770 coding upstream 412705 64951842 ~ 64957672 (-)
LOC118964437 NA coding upstream 524143 65063280 ~ 65064797 (-)
mcfd2 mcfd2 coding upstream 629705 65168842 ~ 65171950 (-)
LOC110526894 LOC106605012 non-coding downstream 45826 64472402 ~ 64735581 (-)
G71450 NA non-coding downstream 96027 64441972 ~ 64442508 (-)
G71208 NA non-coding downstream 289727 64248537 ~ 64248808 (-)
G71204 LOC106585892 non-coding downstream 292162 64246145 ~ 64246373 (-)
G71183 NA non-coding downstream 309508 64228818 ~ 64229027 (-)
G72236 NA non-coding upstream 105347 64644484 ~ 64647187 (-)
G72237 NA non-coding upstream 105915 64645052 ~ 64647635 (-)
G72292 NA non-coding upstream 184211 64723348 ~ 64723769 (-)
G72310 NA non-coding upstream 204342 64743479 ~ 64744536 (-)
G72324 LOC106576775 non-coding upstream 242264 64781401 ~ 64783733 (-)
G70013 NA other downstream 1260783 63277208 ~ 63277752 (-)
G69210 NA other downstream 2120239 62411522 ~ 62418296 (-)
LOC110526417 LOC106576819 other downstream 2556140 61981652 ~ 61983330 (-)
G68736 NA other downstream 2852227 61682278 ~ 61686308 (-)
tjap1 tjap1 other upstream 2279707 66806836 ~ 66883731 (-)
LOC110527436 ppp2r5d other upstream 2455545 66965664 ~ 67010646 (-)
LOC110527584 LOC106576720 other upstream 2847372 67386509 ~ 67389299 (-)
LOC110527687 sncg other upstream 3130452 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 3618824 68157900 ~ 68162024 (-)

Expression


Co-expression Network